RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 VEGFAP15692 232 aaPredicted RBP23.06■■□□□ 1.28
CHD1L-201ENST00000361293 USP5P45974 858 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 C12orf60Q5U649 245 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 USP49Q70CQ1 688 aa23.05■■□□□ 1.28
CHD1L-201ENST00000361293 ZNF804AQ7Z570 1209 aa23.05■■□□□ 1.28
CHD1L-201ENST00000361293 CNNM3Q8NE01 707 aa23.05■■□□□ 1.28
CHD1L-201ENST00000361293 CERKQ8TCT0 537 aa23.05■■□□□ 1.28
CHD1L-201ENST00000361293 UFL1O94874 794 aa23.05■■□□□ 1.28
CHD1L-201ENST00000361293 KRT2P35908 639 aa23.05■■□□□ 1.28
CHD1L-201ENST00000361293 XBP1P17861 261 aa23.04■■□□□ 1.28
CHD1L-201ENST00000361293 CTCFLQ8NI51 663 aaPredicted RBP23.04■■□□□ 1.28
CHD1L-201ENST00000361293 IL17RBQ9NRM6 502 aa23.04■■□□□ 1.28
CHD1L-201ENST00000361293 FILIP1Q7Z7B0 1213 aa23.04■■□□□ 1.28
CHD1L-201ENST00000361293 HSD3B7Q9H2F3 369 aa23.04■■□□□ 1.28
CHD1L-201ENST00000361293 PCDHA5Q9Y5H7 936 aa23.04■■□□□ 1.28
CHD1L-201ENST00000361293 MDM2Q00987 491 aaPredicted RBP23.03■■□□□ 1.28
CHD1L-201ENST00000361293 TFAP4Q01664 338 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 TMED8Q6PL24 325 aaPredicted RBP23.03■■□□□ 1.28
CHD1L-201ENST00000361293 TGFBRAP1Q8WUH2 860 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 ADAMTS3O15072 1205 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 POLR2DO15514 142 aaKnown RBP23.03■■□□□ 1.28
CHD1L-201ENST00000361293 DDR1Q08345 913 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 LRRC8AQ8IWT6 810 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 SLC44A5Q8NCS7 719 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 CSRNP2Q9H175 543 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 CD209Q9NNX6 404 aa23.03■■□□□ 1.28
CHD1L-201ENST00000361293 SRPRBQ9Y5M8 271 aaKnown RBP23.03■■□□□ 1.28
CHD1L-201ENST00000361293 C15orf52Q6ZUT6 534 aaKnown RBP23.02■■□□□ 1.28
CHD1L-201ENST00000361293 TNFRSF25Q93038 417 aa23.02■■□□□ 1.28
CHD1L-201ENST00000361293 BMP6P22004 513 aa23.02■■□□□ 1.28
CHD1L-201ENST00000361293 ST5P78524 1137 aa23.02■■□□□ 1.28
CHD1L-201ENST00000361293 PDILTQ8N807 584 aa23.02■■□□□ 1.28
CHD1L-201ENST00000361293 RTFDC1Q9BY42 306 aaPredicted RBP23.02■■□□□ 1.28
CHD1L-201ENST00000361293 XPO4Q9C0E2 1151 aaKnown RBP23.02■■□□□ 1.28
CHD1L-201ENST00000361293 PRR29P0C7W0 189 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
CHD1L-201ENST00000361293 PLCD1P51178 756 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 GRAMD1CQ8IYS0 662 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 IFNKQ9P0W0 207 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 SERTAD1Q9UHV2 236 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 NAV1Q8NEY1 1877 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 TRIM75PA6NK02 468 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 TRIM37O94972 964 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 ATP1A3P13637 1013 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 MAPKAPK5Q8IW41 473 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 FAM13BQ9NYF5 915 aa23.01■■□□□ 1.27
CHD1L-201ENST00000361293 SAP30BPQ9UHR5 308 aaKnown RBP23.01■■□□□ 1.27
CHD1L-201ENST00000361293 USP17L3A6NCW0 530 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 USP17L4A6NCW7 530 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 USP17L1Q7RTZ2 530 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 ZNF579Q8NAF0 562 aaKnown RBP23■■□□□ 1.27
CHD1L-201ENST00000361293 CEP131Q9UPN4 1083 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 CDK5RAP2Q96SN8 1893 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 PPP4CP60510 307 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 QTRT2Q9H974 415 aaKnown RBP23■■□□□ 1.27
CHD1L-201ENST00000361293 POLLQ9UGP5 575 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 GGA1Q9UJY5 639 aa23■■□□□ 1.27
CHD1L-201ENST00000361293 SMC2O95347 1197 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 BAG3O95817 575 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 SCG2P13521 617 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 GSTO1P78417 241 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 STAG2Q8N3U4 1231 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 ROBO3Q96MS0 1386 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 IKBKBO14920 756 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 POSTNQ15063 836 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 RBM17Q96I25 401 aaKnown RBP22.99■■□□□ 1.27
CHD1L-201ENST00000361293 KAT14Q9H8E8 782 aa22.99■■□□□ 1.27
CHD1L-201ENST00000361293 A0A087X0B3 334 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 BTDP43251 543 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 PNMA1Q8ND90 353 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 EPSTI1Q96J88 318 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 SMTNL1A8MU46 457 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 POLRMTO00411 1230 aaKnown RBP22.98■■□□□ 1.27
CHD1L-201ENST00000361293 ACTN4O43707 911 aaKnown RBP22.98■■□□□ 1.27
CHD1L-201ENST00000361293 IL1R1P14778 569 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 ATP2B4P23634 1241 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 ZNF174Q15697 407 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 MKNK2Q9HBH9 465 aa22.98■■□□□ 1.27
CHD1L-201ENST00000361293 BRWD3Q6RI45 1802 aa22.97■■□□□ 1.27
CHD1L-201ENST00000361293 PFKFB3Q16875 520 aaPredicted RBP22.97■■□□□ 1.27
CHD1L-201ENST00000361293 SLC27A3Q5K4L6 730 aa22.97■■□□□ 1.27
CHD1L-201ENST00000361293 DGKHQ86XP1 1220 aa22.97■■□□□ 1.27
CHD1L-201ENST00000361293 PROM2Q8N271 834 aa22.97■■□□□ 1.27
CHD1L-201ENST00000361293 TBC1D16Q8TBP0 767 aa22.97■■□□□ 1.27
CHD1L-201ENST00000361293 BRMS1Q9HCU9 246 aa22.97■■□□□ 1.27
CHD1L-201ENST00000361293 MAN1B1Q9UKM7 699 aa22.97■■□□□ 1.27
CHD1L-201ENST00000361293 CCZ1BP86790 482 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 CCZ1P86791 482 aaPredicted RBP22.96■■□□□ 1.27
CHD1L-201ENST00000361293 MYL5Q02045 173 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 ZNF827Q17R98 1081 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 SLC35G1Q2M3R5 365 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 MYRIPQ8NFW9 859 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 NOL10Q9BSC4 688 aaKnown RBP22.96■■□□□ 1.27
CHD1L-201ENST00000361293 FANCCQ00597 558 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 MFSD14BQ5SR56 506 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 RASGRP2Q7LDG7 609 aa22.96■■□□□ 1.27
CHD1L-201ENST00000361293 ELOA2Q8IYF1 753 aaPredicted RBP22.96■■□□□ 1.27
CHD1L-201ENST00000361293 GPKOWQ92917 476 aaPredicted RBP eCLIP22.96■■□□□ 1.274e-6■■□□□ 14.2
CHD1L-201ENST00000361293 C16orf45Q96MC5 204 aaPredicted RBP22.96■■□□□ 1.27
CHD1L-201ENST00000361293 MTMR7Q9Y216 660 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms