RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 POLRMTO00411 1230 aaKnown RBP25.98■■□□□ 1.75
LDB1-201ENST00000361198 TMTC3Q6ZXV5 915 aa25.98■■□□□ 1.75
LDB1-201ENST00000361198 NEMFO60524 1076 aa25.98■■□□□ 1.75
LDB1-201ENST00000361198 GSTO1P78417 241 aa25.98■■□□□ 1.75
LDB1-201ENST00000361198 DPCR1Q3MIW9 517 aa25.98■■□□□ 1.75
LDB1-201ENST00000361198 PCDHB6Q9Y5E3 794 aa25.98■■□□□ 1.75
LDB1-201ENST00000361198 BBOX1O75936 387 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 BAG3O95817 575 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 KRI1Q8N9T8 703 aaKnown RBP25.97■■□□□ 1.75
LDB1-201ENST00000361198 XBP1P17861 261 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 PPP4CP60510 307 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 RCSD1Q6JBY9 416 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 LRRC8AQ8IWT6 810 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 DYNLL2Q96FJ2 89 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 PHF20Q9BVI0 1012 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 NAT10Q9H0A0 1025 aaKnown RBP25.97■■□□□ 1.75
LDB1-201ENST00000361198 CABP5Q9NP86 173 aa25.97■■□□□ 1.75
LDB1-201ENST00000361198 BIN1O00499 593 aa25.96■■□□□ 1.75
LDB1-201ENST00000361198 HOXA10P31260 410 aaPredicted RBP25.96■■□□□ 1.75
LDB1-201ENST00000361198 ZRSR1Q15695 479 aaKnown RBP25.96■■□□□ 1.75
LDB1-201ENST00000361198 TXNRD1Q16881 649 aa25.96■■□□□ 1.75
LDB1-201ENST00000361198 SRBD1Q8N5C6 995 aaKnown RBP25.96■■□□□ 1.75
LDB1-201ENST00000361198 AOPEPQ8N6M6 819 aa25.96■■□□□ 1.75
LDB1-201ENST00000361198 CTCFLQ8NI51 663 aaPredicted RBP25.96■■□□□ 1.75
LDB1-201ENST00000361198 TGFBRAP1Q8WUH2 860 aa25.96■■□□□ 1.75
LDB1-201ENST00000361198 POLLQ9UGP5 575 aa25.96■■□□□ 1.75
LDB1-201ENST00000361198 IL1R1P14778 569 aa25.95■■□□□ 1.75
LDB1-201ENST00000361198 RBM6P78332 1123 aaKnown RBP25.95■■□□□ 1.75
LDB1-201ENST00000361198 CCDC94Q9BW85 323 aaPredicted RBP25.95■■□□□ 1.75
LDB1-201ENST00000361198 CNTNAP5Q8WYK1 1306 aa25.95■■□□□ 1.74
LDB1-201ENST00000361198 GRIN1Q05586 938 aa25.95■■□□□ 1.74
LDB1-201ENST00000361198 SPECC1Q5M775 1068 aa25.95■■□□□ 1.74
LDB1-201ENST00000361198 RTFDC1Q9BY42 306 aaPredicted RBP25.95■■□□□ 1.74
LDB1-201ENST00000361198 ATP2B1P20020 1258 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 TFAP4Q01664 338 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 PODXL2Q9NZ53 605 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 FBXO2Q9UK22 296 aaPredicted RBP25.94■■□□□ 1.74
LDB1-201ENST00000361198 KCNH3Q9ULD8 1083 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 FAM205CA6NFA0 338 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 LDHCP07864 332 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 PTPREP23469 700 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 TBC1D16Q8TBP0 767 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 NOL10Q9BSC4 688 aaKnown RBP25.94■■□□□ 1.74
LDB1-201ENST00000361198 IL17RBQ9NRM6 502 aa25.94■■□□□ 1.74
LDB1-201ENST00000361198 EARS2Q5JPH6 523 aaKnown RBP25.93■■□□□ 1.74
LDB1-201ENST00000361198 KLRG2A4D1S0 409 aaPredicted RBP25.93■■□□□ 1.74
LDB1-201ENST00000361198 KRT2P35908 639 aa25.93■■□□□ 1.74
LDB1-201ENST00000361198 NLRP12P59046 1061 aa25.93■■□□□ 1.74
LDB1-201ENST00000361198 LONRF3Q496Y0 759 aa25.93■■□□□ 1.74
LDB1-201ENST00000361198 CRAMP1Q96RY5 1269 aa25.93■■□□□ 1.74
LDB1-201ENST00000361198 MAPKAPK5Q8IW41 473 aa25.92■■□□□ 1.74
LDB1-201ENST00000361198 ANKRD7Q92527 254 aa25.92■■□□□ 1.74
LDB1-201ENST00000361198 C16orf45Q96MC5 204 aaPredicted RBP25.92■■□□□ 1.74
LDB1-201ENST00000361198 BPIFA3Q9BQP9 254 aa25.92■■□□□ 1.74
LDB1-201ENST00000361198 ROBO3Q96MS0 1386 aa25.92■■□□□ 1.74
LDB1-201ENST00000361198 BTDP43251 543 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 PLCD1P51178 756 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 TUBE1Q9UJT0 475 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 SMTNL1A8MU46 457 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 TNNT1P13805 278 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 PNOCQ13519 176 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 NPY5RQ15761 445 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 ISM2Q6H9L7 571 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 MKNK2Q9HBH9 465 aa25.91■■□□□ 1.74
LDB1-201ENST00000361198 KRBA2Q6ZNG9 492 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 SLC44A5Q8NCS7 719 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 PAXBP1Q9Y5B6 917 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 NAV1Q8NEY1 1877 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 C6orf229H3BNL8 230 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 MFSD14BQ5SR56 506 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 METTL16Q86W50 562 aaKnown RBP25.9■■□□□ 1.74
LDB1-201ENST00000361198 DGKHQ86XP1 1220 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 AMOTL1Q8IY63 956 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 KAT14Q9H8E8 782 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 SAP30BPQ9UHR5 308 aaKnown RBP25.9■■□□□ 1.74
LDB1-201ENST00000361198 CEP131Q9UPN4 1083 aa25.9■■□□□ 1.74
LDB1-201ENST00000361198 GPR75-ASB3A0A0A6YYF3 556 aa25.89■■□□□ 1.74
LDB1-201ENST00000361198 CNNM3Q8NE01 707 aa25.89■■□□□ 1.74
LDB1-201ENST00000361198 ZMYND15Q9H091 742 aa25.89■■□□□ 1.74
LDB1-201ENST00000361198 SRPRBQ9Y5M8 271 aaKnown RBP25.89■■□□□ 1.74
LDB1-201ENST00000361198 CDK5RAP2Q96SN8 1893 aa25.89■■□□□ 1.74
LDB1-201ENST00000361198 VEGFAP15692 232 aaPredicted RBP25.89■■□□□ 1.73
LDB1-201ENST00000361198 USP17L3A6NCW0 530 aa25.88■■□□□ 1.73
LDB1-201ENST00000361198 USP17L4A6NCW7 530 aa25.88■■□□□ 1.73
LDB1-201ENST00000361198 ARID5BQ14865 1188 aa25.88■■□□□ 1.73
LDB1-201ENST00000361198 SYCP1Q15431 976 aa25.88■■□□□ 1.73
LDB1-201ENST00000361198 USP17L1Q7RTZ2 530 aa25.88■■□□□ 1.73
LDB1-201ENST00000361198 PNMA1Q8ND90 353 aa25.88■■□□□ 1.73
LDB1-201ENST00000361198 NOM1Q5C9Z4 860 aaKnown RBP25.88■■□□□ 1.73
LDB1-201ENST00000361198 FOXP4Q8IVH2 680 aaPredicted RBP25.88■■□□□ 1.73
LDB1-201ENST00000361198 TNFRSF25Q93038 417 aa25.88■■□□□ 1.73
LDB1-201ENST00000361198 TRIM75PA6NK02 468 aa25.87■■□□□ 1.73
LDB1-201ENST00000361198 SCG2P13521 617 aa25.87■■□□□ 1.73
LDB1-201ENST00000361198 NT5C2P49902 561 aa25.87■■□□□ 1.73
LDB1-201ENST00000361198 TPD52L1Q16890 204 aaPredicted RBP25.87■■□□□ 1.73
LDB1-201ENST00000361198 ZNF827Q17R98 1081 aa25.87■■□□□ 1.73
LDB1-201ENST00000361198 ZNF579Q8NAF0 562 aaKnown RBP25.87■■□□□ 1.73
LDB1-201ENST00000361198 ANKS1AQ92625 1134 aa25.87■■□□□ 1.73
LDB1-201ENST00000361198 KCND1Q9NSA2 647 aa25.87■■□□□ 1.73
LDB1-201ENST00000361198 LTBP1Q14766 1721 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms