RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ZNF280AP59817 542 aaPredicted RBP16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 TMEM67Q5HYA8 995 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 APOA5Q6Q788 366 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 CERS3Q8IU89 383 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 TMTC2Q8N394 836 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 GPRC5DQ9NZD1 345 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 USP25Q9UHP3 1055 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 CFAP45Q9UL16 551 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 CCDC183Q5T5S1 534 aa16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 CPLX2Q6PUV4 134 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 ZFPM1Q8IX07 1006 aa16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 TACC3Q9Y6A5 838 aa16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 IFIT3O14879 490 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 METAP2P50579 478 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■■■□ 20.9
CSNK1E-201ENST00000359867 C17orf53Q8N3J3 647 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 NKX2-3Q8TAU0 364 aa16.07■□□□□ 0.16
CSNK1E-201ENST00000359867 SPATA32Q96LK8 384 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 VEZTQ9HBM0 779 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 MYH1P12882 1939 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 ZBTB43O43298 467 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 FAM173BQ6P4H8 233 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 TRPM4Q8TD43 1214 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 ORC3Q9UBD5 711 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 FAM198AQ9UFP1 575 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 NID2Q14112 1375 aa16.06■□□□□ 0.16
CSNK1E-201ENST00000359867 DDX60LQ5H9U9 1706 aaKnown RBP16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 TCP10L2B9ZVM9 353 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 PLCD1P51178 756 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 RCAN1P53805 252 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 DNTTIP2Q5QJE6 756 aaKnown RBP16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 ZBED3Q96IU2 234 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 ARPP21Q9UBL0 812 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 ZNF70Q9UC06 446 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 LAMB1P07942 1786 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 ERICH2A1L162 156 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 CCDC69A6NI79 296 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 H7C1D1 291 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 POLR3DP05423 398 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 FGRP09769 529 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 KIF4BQ2VIQ3 1234 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 ESR2Q92731 530 aa16.05■□□□□ 0.16
CSNK1E-201ENST00000359867 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 MTMR14Q8NCE2 650 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 C8orf76Q96K31 380 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 ZNF396Q96N95 335 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 OSBPL5Q9H0X9 879 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 TFIP11Q9UBB9 837 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 SLC12A7Q9Y666 1083 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 PRDM1O75626 825 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 RRP12Q5JTH9 1297 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 FBXO18Q8NFZ0 1043 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 DYNLL2Q96FJ2 89 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 TOMM22Q9NS69 142 aa16.04■□□□□ 0.16
CSNK1E-201ENST00000359867 WTAPQ15007 396 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 C12orf60Q5U649 245 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 TSC1Q92574 1164 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 IDI2Q9BXS1 227 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 GOLGA8AA7E2F4 631 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 MYO1BO43795 1136 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 ADD1P35611 737 aaKnown RBP16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 SENP2Q9HC62 589 aa16.03■□□□□ 0.16
CSNK1E-201ENST00000359867 GOLGA6L4A6NEF3 574 aa16.02■□□□□ 0.16
CSNK1E-201ENST00000359867 DDTLA6NHG4 134 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-201ENST00000359867 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-201ENST00000359867 NT5C2P49902 561 aa16.02■□□□□ 0.16
CSNK1E-201ENST00000359867 SASS6Q6UVJ0 657 aa16.02■□□□□ 0.16
CSNK1E-201ENST00000359867 ZSCAN29Q8IWY8 852 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-201ENST00000359867 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-201ENST00000359867 GLTPD2A6NH11 291 aa16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 HIRAP54198 1017 aaPredicted RBP16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 SH3BP5LQ7L8J4 393 aa16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 RAB11FIP4Q86YS3 637 aa16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 CDAN1Q8IWY9 1227 aa16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 STK36Q9NRP7 1315 aa16.02■□□□□ 0.15
CSNK1E-201ENST00000359867 ADCY5O95622 1261 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 CDC27P30260 824 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 NTRK3Q16288 839 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 MICU3Q86XE3 530 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 AMOTL1Q8IY63 956 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 SLC3A2P08195 630 aaKnown RBP16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 FOSBP53539 338 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
CSNK1E-201ENST00000359867 TMEM39BQ9GZU3 492 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms