RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PLEKHA4Q9H4M7 779 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 CXorf56Q9H5V9 222 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 MAN1B1Q9UKM7 699 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.3
UBAP1-202ENST00000359544 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
UBAP1-202ENST00000359544 FOXP4Q8IVH2 680 aaPredicted RBP16.89■□□□□ 0.29
UBAP1-202ENST00000359544 ANKRD20A12PQ8NF67 263 aa16.89■□□□□ 0.29
UBAP1-202ENST00000359544 UBR3Q6ZT12 1888 aa16.89■□□□□ 0.29
UBAP1-202ENST00000359544 CCDC172P0C7W6 258 aa16.89■□□□□ 0.29
UBAP1-202ENST00000359544 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
UBAP1-202ENST00000359544 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.89■□□□□ 0.29
UBAP1-202ENST00000359544 EBAG9O00559 213 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 FMR1Q06787 632 aaKnown RBP eCLIP16.88■□□□□ 0.29
UBAP1-202ENST00000359544 RPAINQ86UA6 219 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 IGSF22Q8N9C0 903 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-202ENST00000359544 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 PPP1R1BQ9UD71 204 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-202ENST00000359544 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
UBAP1-202ENST00000359544 MAP2K2P36507 400 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 POSTNQ15063 836 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 RC3H1Q5TC82 1133 aaKnown RBP16.88■□□□□ 0.29
UBAP1-202ENST00000359544 NT5DC1Q5TFE4 455 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 VPS37DQ86XT2 251 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 HPCAL4Q9UM19 191 aa16.88■□□□□ 0.29
UBAP1-202ENST00000359544 STARD3NLO95772 234 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 RFC4P35249 363 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
UBAP1-202ENST00000359544 TTC39AQ5SRH9 613 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBAP1-202ENST00000359544 MYO6Q9UM54 1294 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 HPS5Q9UPZ3 1129 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 CEP83Q9Y592 693 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 NEURL1BA8MQ27 555 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 MFAP3LO75121 409 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
UBAP1-202ENST00000359544 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
UBAP1-202ENST00000359544 RBL2Q08999 1139 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 CT47A1Q5JQC4 288 aaPredicted RBP16.87■□□□□ 0.29
UBAP1-202ENST00000359544 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
UBAP1-202ENST00000359544 GOLIM4O00461 696 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 PRC1O43663 620 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 RFX5P48382 616 aaPredicted RBP16.86■□□□□ 0.29
UBAP1-202ENST00000359544 MNAT1P51948 309 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 STIM1Q13586 685 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 MORC3Q14149 939 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 GCKRQ14397 625 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 NOA1Q8NC60 698 aaKnown RBP16.86■□□□□ 0.29
UBAP1-202ENST00000359544 FAM76AQ8TAV0 307 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 GJB4Q9NTQ9 266 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 MAST3O60307 1309 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 A0A0G2JLW4 131 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 KIF1CO43896 1103 aaKnown RBP16.86■□□□□ 0.29
UBAP1-202ENST00000359544 CDKL5O76039 1030 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 APPP05067 770 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 FECHP22830 423 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 PLCD1P51178 756 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 USP14P54578 494 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 SETQ01105 290 aaPredicted RBP16.86■□□□□ 0.29
UBAP1-202ENST00000359544 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 KRI1Q8N9T8 703 aaKnown RBP16.86■□□□□ 0.29
UBAP1-202ENST00000359544 CLIC6Q96NY7 704 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 ALG1Q9BT22 464 aa16.86■□□□□ 0.29
UBAP1-202ENST00000359544 NBPF26B4DH59 902 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 AKAP17AQ02040 695 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 IMMTQ16891 758 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 NBPF10Q6P3W6 841 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 TMTC1Q8IUR5 882 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 TRMT44Q8IYL2 757 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 NBPF15Q8N660 670 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 COG1Q8WTW3 980 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 CDC5LQ99459 802 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 CRACR2AQ9BSW2 395 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 GPHNQ9NQX3 736 aaPredicted RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 SAMSN1Q9NSI8 373 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 DONSONQ9NYP3 566 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 WWC3Q9ULE0 1092 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 FAM169AQ9Y6X4 670 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 A0A0U1RQJ8 604 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 SHTN1A0MZ66 631 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 TARSL2A2RTX5 802 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 SARSP49591 514 aaKnown RBP16.85■□□□□ 0.29
UBAP1-202ENST00000359544 LIG3P49916 1009 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 AMPD2Q01433 879 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 FILIP1LQ4L180 1135 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 ATRIPQ8WXE1 791 aa16.85■□□□□ 0.29
UBAP1-202ENST00000359544 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
UBAP1-202ENST00000359544 MYL6BP14649 208 aa16.84■□□□□ 0.29
UBAP1-202ENST00000359544 HNRNPH1P31943 449 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms