RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CAVIN4Q5BKX8 364 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 EARS2Q5JPH6 523 aaKnown RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 TRIM65Q6PJ69 517 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 REXO1L1PQ8IX06 675 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 FAM177A1Q8N128 213 aaPredicted RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 EPSTI1Q96J88 318 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 BRMS1Q9HCU9 246 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 ZHX1Q9UKY1 873 aaPredicted RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 V9GY48 417 aaPredicted RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 MYH13Q9UKX3 1938 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 DLEC1Q9Y238 1755 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 BAZ2BQ9UIF8 2168 aaKnown RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 A0A087X0B3 334 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 URI1O94763 535 aaPredicted RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 ADKP55263 362 aaKnown RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 FUT2Q10981 343 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 KLHL10Q6JEL2 608 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 SYMPKQ92797 1274 aaKnown RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 MED15Q96RN5 788 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 CDCA7Q9BWT1 371 aaPredicted RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 BRIP1Q9BX63 1249 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 RBM28Q9NW13 759 aaKnown RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 MORC2Q9Y6X9 1032 aaPredicted RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 COL22A1Q8NFW1 1626 aaPredicted RBP9.8□□□□□ -0.84
RFX3-202ENST00000358730 SYNRGQ9UMZ2 1314 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 FANCGO15287 622 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 PRPF3O43395 683 aaKnown RBP9.79□□□□□ -0.84
RFX3-202ENST00000358730 UBE4AQ14139 1066 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 KRT222Q8N1A0 295 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 TC2NQ8N9U0 490 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 MNS1Q8NEH6 495 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 SPATA20Q8TB22 786 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 WNT7AO00755 349 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 CASP1P29466 404 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 ARHGAP29Q52LW3 1261 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 LAMB1P07942 1786 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 SPATA31A1Q5TZJ5 1347 aa9.79□□□□□ -0.84
RFX3-202ENST00000358730 STX10O60499 249 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 DDAH1O94760 285 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 BMP15O95972 392 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 SLFN14P0C7P3 912 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 CALM1P0DP23 149 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 CALM2P0DP24 149 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 CALM3P0DP25 149 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 ERCC5P28715 1186 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 TROAPQ12815 778 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 TOGARAM2Q6ZUX3 1019 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 TMTC3Q6ZXV5 915 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 MARCH10Q8NA82 808 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 ZNF384Q8TF68 577 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 CNTNAP5Q8WYK1 1306 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 COL5A3P25940 1745 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 GOLGA6L9A6NEM1 432 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 USP17L12C9JPN9 530 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 USP17L21D6R901 530 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 IGSF3O75054 1194 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 H2AFXP16104 143 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 STX17P56962 302 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 ZNF174Q15697 407 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 NOM1Q5C9Z4 860 aaKnown RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 TTC38Q5R3I4 469 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 CTR9Q6PD62 1173 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 UBXN4Q92575 508 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 PAGE5Q96GU1 130 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 BSDC1Q9NW68 430 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 PARP3Q9Y6F1 533 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 A0A1B0GTH6 734 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 GNG11P61952 73 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 EVX2Q03828 476 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 SMYD4Q8IYR2 804 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 CTCFLQ8NI51 663 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 FAM84BQ96KN1 310 aaPredicted RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 DESI2Q9BSY9 194 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 SRRTQ9BXP5 876 aaKnown RBP9.78□□□□□ -0.84
RFX3-202ENST00000358730 ZNF446Q9NWS9 450 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 MINPP1Q9UNW1 487 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 NRAPQ86VF7 1730 aa9.78□□□□□ -0.84
RFX3-202ENST00000358730 NMT2O60551 498 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 CD44P16070 742 aaKnown RBP9.77□□□□□ -0.85
RFX3-202ENST00000358730 KLRK1P26718 216 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 GTF2E1P29083 439 aaPredicted RBP9.77□□□□□ -0.85
RFX3-202ENST00000358730 NR1I3Q14994 352 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
RFX3-202ENST00000358730 CARD6Q9BX69 1037 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 CASQ1P31415 396 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 CLCN6P51797 869 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 MECOMQ03112 1051 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 GABPB1Q06547 395 aaPredicted RBP9.77□□□□□ -0.85
RFX3-202ENST00000358730 DPYDQ12882 1025 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 CUL4BQ13620 913 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 SF3B3Q15393 1217 aaKnown RBP9.77□□□□□ -0.85
RFX3-202ENST00000358730 NPY5RQ15761 445 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms