RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 SCNN1DP51172 638 aa15.38■□□□□ 0.05
NFIX-201ENST00000358552 RBM5P52756 815 aaKnown RBP eCLIP15.38■□□□□ 0.05
NFIX-201ENST00000358552 TNIP1Q15025 636 aa15.38■□□□□ 0.05
NFIX-201ENST00000358552 FKBP1CQ5VVH2 108 aa15.38■□□□□ 0.05
NFIX-201ENST00000358552 NKX2-3Q8TAU0 364 aa15.38■□□□□ 0.05
NFIX-201ENST00000358552 COL2A1P02458 1487 aaPredicted RBP15.38■□□□□ 0.05
NFIX-201ENST00000358552 NFKBIEO00221 500 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 TOP1P11387 765 aaKnown RBP15.37■□□□□ 0.05
NFIX-201ENST00000358552 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
NFIX-201ENST00000358552 FAM47AQ5JRC9 791 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 NBPF11Q86T75 865 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 MTMR14Q8NCE2 650 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 FOXP1Q9H334 677 aaPredicted RBP15.37■□□□□ 0.05
NFIX-201ENST00000358552 BRMS1Q9HCU9 246 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 RRAGDQ9NQL2 400 aaPredicted RBP15.37■□□□□ 0.05
NFIX-201ENST00000358552 SAP30BPQ9UHR5 308 aaKnown RBP15.37■□□□□ 0.05
NFIX-201ENST00000358552 RCOR1Q9UKL0 485 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 MYH1P12882 1939 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 U2AF2P26368 475 aaKnown RBP eCLIP15.37■□□□□ 0.05
NFIX-201ENST00000358552 PICALMQ13492 652 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 ZSCAN23Q3MJ62 389 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 TMTC3Q6ZXV5 915 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 PNMA1Q8ND90 353 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 GPT2Q8TD30 523 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 DYNLL2Q96FJ2 89 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
NFIX-201ENST00000358552 TCHHQ07283 1943 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 CDK5RAP2Q96SN8 1893 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 YEATS4O95619 227 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 RXRAP19793 462 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 RPS12P25398 132 aaKnown RBP15.36■□□□□ 0.05
NFIX-201ENST00000358552 KRT40Q6A162 431 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 RCSD1Q6JBY9 416 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 CAVIN1Q6NZI2 390 aaKnown RBP15.36■□□□□ 0.05
NFIX-201ENST00000358552 GAS2L3Q86XJ1 694 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 CCDC144CPQ8IYA2 1237 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 KCNG4Q8TDN1 519 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 LEO1Q8WVC0 666 aaPredicted RBP15.36■□□□□ 0.05
NFIX-201ENST00000358552 PHKBQ93100 1093 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 MYL10Q9BUA6 226 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 TRIM34Q9BYJ4 488 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 IL17RBQ9NRM6 502 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
NFIX-201ENST00000358552 DDX60LQ5H9U9 1706 aaKnown RBP15.36■□□□□ 0.05
NFIX-201ENST00000358552 COL4A5P29400 1685 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 YDJCA8MPS7 323 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 MYO1BO43795 1136 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
NFIX-201ENST00000358552 GRM4Q14833 912 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 FOXD4L6Q3SYB3 417 aaPredicted RBP15.35■□□□□ 0.05
NFIX-201ENST00000358552 CFAP100Q494V2 611 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 FOXD4L3Q6VB84 417 aaPredicted RBP15.35■□□□□ 0.05
NFIX-201ENST00000358552 JMYQ8N9B5 988 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 GMLQ99445 158 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 SH3GLB2Q9NR46 395 aa15.35■□□□□ 0.05
NFIX-201ENST00000358552 MMP1P03956 469 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 CCDC183Q5T5S1 534 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 MYSM1Q5VVJ2 828 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 RAB11FIP4Q86YS3 637 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 KCNQ5Q9NR82 932 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 ATRNL1Q5VV63 1379 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 FUT2Q10981 343 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 RILPL1Q5EBL4 403 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
NFIX-201ENST00000358552 TMEM47Q9BQJ4 181 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 MXD3Q9BW11 206 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
NFIX-201ENST00000358552 SYNPO2Q9UMS6 1093 aa15.34■□□□□ 0.05
NFIX-201ENST00000358552 SMIM22K7EJ46 135 aa15.33■□□□□ 0.04
NFIX-201ENST00000358552 PSMD14O00487 310 aa15.33■□□□□ 0.04
NFIX-201ENST00000358552 TTLL1O95922 423 aa15.33■□□□□ 0.04
NFIX-201ENST00000358552 CALML3P27482 149 aa15.33■□□□□ 0.04
NFIX-201ENST00000358552 CIAPIN1Q6FI81 312 aa15.33■□□□□ 0.04
NFIX-201ENST00000358552 ZSCAN30Q86W11 494 aa15.33■□□□□ 0.04
NFIX-201ENST00000358552 GDPD2Q9HCC8 539 aa15.33■□□□□ 0.04
NFIX-201ENST00000358552 DDX4Q9NQI0 724 aaKnown RBP15.33■□□□□ 0.04
NFIX-201ENST00000358552 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
NFIX-201ENST00000358552 hCG_1984214I3L0E3 225 aa15.32■□□□□ 0.04
NFIX-201ENST00000358552 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
NFIX-201ENST00000358552 MSNP26038 577 aaKnown RBP15.32■□□□□ 0.04
NFIX-201ENST00000358552 ARHGAP27Q6ZUM4 889 aa15.32■□□□□ 0.04
NFIX-201ENST00000358552 ZNF713Q8N859 430 aaPredicted RBP15.32■□□□□ 0.04
NFIX-201ENST00000358552 CCDC12Q8WUD4 166 aaPredicted RBP15.32■□□□□ 0.04
NFIX-201ENST00000358552 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
NFIX-201ENST00000358552 MTMR4Q9NYA4 1195 aa15.32■□□□□ 0.04
NFIX-201ENST00000358552 CEP131Q9UPN4 1083 aa15.32■□□□□ 0.04
NFIX-201ENST00000358552 MORC2Q9Y6X9 1032 aaPredicted RBP15.32■□□□□ 0.04
NFIX-201ENST00000358552 V9GY48 417 aaPredicted RBP15.32■□□□□ 0.04
NFIX-201ENST00000358552 PALM3A6NDB9 673 aaPredicted RBP15.31■□□□□ 0.04
NFIX-201ENST00000358552 NMT2O60551 498 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 BMP15O95972 392 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 PARP1P09874 1014 aaKnown RBP15.31■□□□□ 0.04
NFIX-201ENST00000358552 GUCY1B3Q02153 619 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 RASSF7Q02833 373 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 SF3A1Q15459 793 aaKnown RBP15.31■□□□□ 0.04
NFIX-201ENST00000358552 ASPRV1Q53RT3 343 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms