RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 APOA5Q6Q788 366 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
RNF40-202ENST00000357890 FAM71BQ8TC56 605 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 DPF2Q92785 391 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 KRT23Q9C075 422 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 CEP83Q9Y592 693 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 KIF1AQ12756 1690 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 ZMYM6O95789 1325 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 MAP3K15Q6ZN16 1313 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 CUTAO60888 179 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 TRIM28Q13263 835 aaKnown RBP11.26□□□□□ -0.61
RNF40-202ENST00000357890 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 CCDC114Q96M63 670 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 SLC4A4Q9Y6R1 1079 aa11.26□□□□□ -0.61
RNF40-202ENST00000357890 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 PDE8AO60658 829 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 ADD2P35612 726 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 UBE3CQ15386 1083 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 NUTM2AQ8IVF1 878 aaPredicted RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 RIN2Q8WYP3 895 aaPredicted RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 NAPGQ99747 312 aaPredicted RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 SUFUQ9UMX1 484 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 GOLGA6L10A6NI86 522 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 PDE6AP16499 860 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 PEX19P40855 299 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 NOP2P46087 812 aaKnown RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 POSTNQ15063 836 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 DZIP3Q86Y13 1208 aaKnown RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 PSMB7Q99436 277 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 SERTAD1Q9UHV2 236 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 N4BP2Q86UW6 1770 aaPredicted RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
RNF40-202ENST00000357890 SOWAHDA6NJG2 315 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 ENC1O14682 589 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 PPFIA4O75335 1185 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 PDE8BO95263 885 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 SLC35F6Q8N357 371 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 LPIN2Q92539 896 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 STAMQ92783 540 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 FUT8Q9BYC5 575 aa11.25□□□□□ -0.61
RNF40-202ENST00000357890 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 GOLGA6BA6NDN3 693 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 IKBKBO14920 756 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 BRD2P25440 801 aaKnown RBP11.24□□□□□ -0.61
RNF40-202ENST00000357890 MCAMP43121 646 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 MRPS25P82663 173 aaKnown RBP11.24□□□□□ -0.61
RNF40-202ENST00000357890 SPECC1LQ69YQ0 1117 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 GRAMD1CQ8IYS0 662 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 CNPY4Q8N129 248 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 EXOC5O00471 708 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 MTF1Q14872 753 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 E2F5Q15329 346 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 MICALCLQ6ZW33 695 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNF40-202ENST00000357890 MAATS1Q7Z4T9 603 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 GSPT2Q8IYD1 628 aaKnown RBP11.24□□□□□ -0.61
RNF40-202ENST00000357890 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
RNF40-202ENST00000357890 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
RNF40-202ENST00000357890 COBLO75128 1261 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 RPSAP08865 295 aaKnown RBP11.24□□□□□ -0.61
RNF40-202ENST00000357890 PHKA1P46020 1223 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 NCAPH2Q6IBW4 605 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 KANK3Q6NY19 840 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
RNF40-202ENST00000357890 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 NOSTRINQ8IVI9 506 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 CDC23Q9UJX2 597 aa11.24□□□□□ -0.61
RNF40-202ENST00000357890 TUBGCP6Q96RT7 1819 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 MCM3P25205 808 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 SARNPP82979 210 aaKnown RBP11.23□□□□□ -0.61
RNF40-202ENST00000357890 RILPL1Q5EBL4 403 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 KCTD16Q68DU8 428 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 TMTC2Q8N394 836 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 FAM169AQ9Y6X4 670 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 WDR19Q8NEZ3 1342 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 ZRANB2O95218 330 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNF40-202ENST00000357890 EZRP15311 586 aaKnown RBP11.23□□□□□ -0.61
RNF40-202ENST00000357890 HPDP32754 393 aaPredicted RBP11.23□□□□□ -0.61
RNF40-202ENST00000357890 N4BP2L2Q92802 583 aaPredicted RBP11.23□□□□□ -0.61
RNF40-202ENST00000357890 CPDO75976 1380 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 ABCC12Q96J65 1359 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
RNF40-202ENST00000357890 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
RNF40-202ENST00000357890 FOXN1O15353 648 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 VSNL1P62760 191 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms