RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 VEZTQ9HBM0 779 aa16.06■□□□□ 0.16
LSS-201ENST00000356396 EVCP57679 992 aa16.06■□□□□ 0.16
LSS-201ENST00000356396 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
LSS-201ENST00000356396 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
LSS-201ENST00000356396 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
LSS-201ENST00000356396 SDF4Q9BRK5 362 aa16.06■□□□□ 0.16
LSS-201ENST00000356396 KAT14Q9H8E8 782 aa16.06■□□□□ 0.16
LSS-201ENST00000356396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■■■■ 46.4
LSS-201ENST00000356396 ANKRD31Q8N7Z5 1873 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 USP17L5A8MUK1 530 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 LIFRP42702 1097 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 JAG1P78504 1218 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 SPTY2D1Q68D10 685 aaPredicted RBP16.05■□□□□ 0.16
LSS-201ENST00000356396 PIK3AP1Q6ZUJ8 805 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 HEATR3Q7Z4Q2 680 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
LSS-201ENST00000356396 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 SPTLC2O15270 562 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
LSS-201ENST00000356396 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.05■□□□□ 0.16
LSS-201ENST00000356396 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
LSS-201ENST00000356396 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 CRKP46108 304 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 APOBEC3HQ6NTF7 200 aaKnown RBP16.05■□□□□ 0.16
LSS-201ENST00000356396 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 A0A1B0GUL6 1792 aa16.05■□□□□ 0.16
LSS-201ENST00000356396 ANO1Q5XXA6 986 aa16.04■□□□□ 0.16
LSS-201ENST00000356396 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
LSS-201ENST00000356396 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
LSS-201ENST00000356396 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
LSS-201ENST00000356396 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
LSS-201ENST00000356396 COA7Q96BR5 231 aa16.04■□□□□ 0.16
LSS-201ENST00000356396 FAM205AQ6ZU69 1335 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
LSS-201ENST00000356396 MCM7P33993 719 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 TYRO3Q06418 890 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
LSS-201ENST00000356396 TRIM44Q96DX7 344 aaPredicted RBP16.03■□□□□ 0.16
LSS-201ENST00000356396 EEF2KMTQ96G04 330 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
LSS-201ENST00000356396 SEMA3EO15041 775 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 IFNAR1P17181 557 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 PNOCQ13519 176 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 EPSTI1Q96J88 318 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 SCN9AQ15858 1988 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 DOCK2Q92608 1830 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 LAMA3Q16787 3333 aa16.03■□□□□ 0.16
LSS-201ENST00000356396 GPR75-ASB3A0A0A6YYF3 556 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 BAG6P46379 1132 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 MAP3K11Q16584 847 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.16
LSS-201ENST00000356396 ARPP21Q9UBL0 812 aaPredicted RBP16.02■□□□□ 0.16
LSS-201ENST00000356396 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 PP2D1A8MPX8 630 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 RASSF7Q02833 373 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 DNAJC18Q9H819 358 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.16
LSS-201ENST00000356396 ARAP2Q8WZ64 1704 aa16.02■□□□□ 0.15
LSS-201ENST00000356396 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.15
LSS-201ENST00000356396 PTMAP06454 111 aaKnown RBP16.02■□□□□ 0.15
LSS-201ENST00000356396 NLRP5P59047 1200 aa16.02■□□□□ 0.15
LSS-201ENST00000356396 PRKG1Q13976 671 aa16.02■□□□□ 0.15
LSS-201ENST00000356396 SHC4Q6S5L8 630 aa16.02■□□□□ 0.15
LSS-201ENST00000356396 SH3BP5LQ7L8J4 393 aa16.02■□□□□ 0.15
LSS-201ENST00000356396 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.15
LSS-201ENST00000356396 LAMA2P24043 3122 aaKnown RBP16.02■□□□□ 0.15
LSS-201ENST00000356396 MMP1P03956 469 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
LSS-201ENST00000356396 PFKFB1P16118 471 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 FUT2Q10981 343 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 RRP1BQ14684 758 aaKnown RBP16.01■□□□□ 0.15
LSS-201ENST00000356396 RCOR1Q9UKL0 485 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 PSMD14O00487 310 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 AFMP43652 599 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 CCDC73Q6ZRK6 1079 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 PIGSQ96S52 555 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 TMEM260Q9NX78 707 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
LSS-201ENST00000356396 KCNA3P22001 575 aa16■□□□□ 0.15
LSS-201ENST00000356396 DHX8Q14562 1220 aaKnown RBP16■□□□□ 0.15
LSS-201ENST00000356396 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
LSS-201ENST00000356396 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
LSS-201ENST00000356396 COL11A2P13942 1736 aaPredicted RBP16■□□□□ 0.15
LSS-201ENST00000356396 ADCY5O95622 1261 aa16■□□□□ 0.15
LSS-201ENST00000356396 TEKT1Q969V4 418 aa16■□□□□ 0.15
LSS-201ENST00000356396 ANAPC4Q9UJX5 808 aa16■□□□□ 0.15
LSS-201ENST00000356396 KIF3AQ9Y496 699 aa16■□□□□ 0.15
LSS-201ENST00000356396 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
LSS-201ENST00000356396 KLRF2D3W0D1 207 aa15.99■□□□□ 0.15
LSS-201ENST00000356396 NBPF9Q3BBW0 867 aa15.99■□□□□ 0.15
LSS-201ENST00000356396 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
LSS-201ENST00000356396 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
LSS-201ENST00000356396 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
LSS-201ENST00000356396 CNTNAP5Q8WYK1 1306 aa15.99■□□□□ 0.15
LSS-201ENST00000356396 MKI67P46013 3256 aaKnown RBP15.99■□□□□ 0.15
LSS-201ENST00000356396 DUOX1Q9NRD9 1551 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms