RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 EVI5LQ96CN4 794 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 RIOK1Q9BRS2 568 aaKnown RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 FSD1Q9BTV5 496 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 ZNF341Q9BYN7 854 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 IRX2Q9BZI1 471 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 CRNKL1Q9BZJ0 848 aaKnown RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 DDX4Q9NQI0 724 aaKnown RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 SCAF8Q9UPN6 1271 aaKnown RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 RNF113AO15541 343 aaKnown RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 NR1I2O75469 434 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 MBD4O95243 580 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 PICALMQ13492 652 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 RGMBQ6NW40 437 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 RASAL3Q86YV0 1011 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 MIGA1Q8NAN2 632 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 TMUB1Q9BVT8 246 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 BAZ2AQ9UIF9 1905 aaKnown RBP4.78□□□□□ -1.65
CNOT4-202ENST00000356162 PHIPQ8WWQ0 1821 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 GGCXP38435 758 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 USP5P45974 858 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 TCP10Q12799 353 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 DEFB115Q30KQ5 88 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 ZMYM1Q5SVZ6 1142 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 NOL9Q5SY16 702 aaKnown RBP4.77□□□□□ -1.65
CNOT4-202ENST00000356162 LDLRAD1Q5T700 205 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 TTC22Q5TAA0 569 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 PRAMEF18Q5VWM3 479 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 LCORLQ8N3X6 602 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.77□□□□□ -1.65
CNOT4-202ENST00000356162 CCDC102AQ96A19 550 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 CCDC136Q96JN2 1154 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 CAPNS2Q96L46 248 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 CSRNP1Q96S65 589 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 DHX36Q9H2U1 1008 aaKnown RBP4.77□□□□□ -1.65
CNOT4-202ENST00000356162 ANGEL1Q9UNK9 670 aaKnown RBP4.77□□□□□ -1.65
CNOT4-202ENST00000356162 LOC285556D6RIA3 1793 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 WDR33Q9C0J8 1336 aaKnown RBP4.77□□□□□ -1.65
CNOT4-202ENST00000356162 HIP1O00291 1037 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 HLA-DOAP06340 250 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 GCGRP47871 477 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 HTRA3P83110 453 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 MAP3K10Q02779 954 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 SH3BP5LQ7L8J4 393 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 MAPKAPK5Q8IW41 473 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 ANKRD13AQ8IZ07 590 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 JMYQ8N9B5 988 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 TGFBRAP1Q8WUH2 860 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 AIDAQ96BJ3 306 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 PRKD2Q9BZL6 878 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 EHD4Q9H223 541 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 PPP4R2Q9NY27 417 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 MKRN1Q9UHC7 482 aaKnown RBP4.77□□□□□ -1.65
CNOT4-202ENST00000356162 HERC5Q9UII4 1024 aaKnown RBP4.77□□□□□ -1.65
CNOT4-202ENST00000356162 ZNF112Q9UJU3 913 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 CSADQ9Y600 493 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 ROBO3Q96MS0 1386 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 PTPRFP10586 1907 aa4.77□□□□□ -1.65
CNOT4-202ENST00000356162 DDTLA6NHG4 134 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 FAM155AB1AL88 458 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 UBE2Q2LH0YL09 131 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 M0R2C6 588 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 USP2O75604 605 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 GNAT2P19087 354 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 VEGFBP49765 207 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 NOGQ13253 232 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 PUS10Q3MIT2 529 aaKnown RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 GIMAP6Q6P9H5 292 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 MOB2Q70IA6 237 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 METTL16Q86W50 562 aaKnown RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ZSCAN29Q8IWY8 852 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ZFPM1Q8IX07 1006 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 SCUBE3Q8IX30 993 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 DNAJC5GQ8N7S2 189 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 OSBP2Q969R2 916 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 WNK4Q96J92 1243 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 WRNIP1Q96S55 665 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ARMT1Q9H993 441 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 HELLSQ9NRZ9 838 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ATP8A2Q9NTI2 1148 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 GTF3C3Q9Y5Q9 886 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 V9GY48 417 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 GREB1LQ9C091 1923 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 RAD50Q92878 1312 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 GPAA1O43292 621 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ADH1BP00325 375 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ZBTB48P10074 688 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ZNF157P51786 506 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 FUT2Q10981 343 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 PRKG1Q13976 671 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 VGLL4Q14135 290 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 MORN1Q5T089 497 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 CYP4F22Q6NT55 531 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 AMOTL1Q8IY63 956 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 DDRGK1Q96HY6 314 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 TBC1D2Q9BYX2 928 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 PUS7LQ9H0K6 701 aaKnown RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 DCP1AQ9NPI6 582 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-202ENST00000356162 GINM1Q9NU53 330 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 PI4KBQ9UBF8 816 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ARPP21Q9UBL0 812 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms