RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NMIQ13287 307 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-201ENST00000356083 CALCRLQ16602 461 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 KIAA1841Q6NSI8 718 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 ANKRD42Q8N9B4 389 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 DNM3Q9UQ16 869 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 NVLO15381 856 aaKnown RBP19.06■□□□□ 0.64
COL27A1-201ENST00000356083 EXOC3O60645 756 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 ARPP19P56211 112 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 SUGCTQ9HAC7 445 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 SDSP20132 328 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 DENND2CQ68D51 928 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 DPY19L2Q6NUT2 758 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 DPP8Q6V1X1 898 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-201ENST00000356083 NELFCDQ8IXH7 590 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 TYW5A2RUC4 315 aaKnown RBP19.06■□□□□ 0.64
COL27A1-201ENST00000356083 BCRP11274 1271 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 NOLC1Q14978 699 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL27A1-201ENST00000356083 ANKRD20A3Q5VUR7 823 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 HERC4Q5GLZ8 1057 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-201ENST00000356083 TTBK2Q6IQ55 1244 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 NR1H4Q96RI1 486 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-201ENST00000356083 C1orf228Q6PIY5 440 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 FIS1Q9Y3D6 152 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 NPR1P16066 1061 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 WDR48Q8TAF3 677 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 ATP6V1E2Q96A05 226 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 SDCCAG3Q96C92 435 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
COL27A1-201ENST00000356083 TYRO3Q06418 890 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 HDXQ7Z353 690 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 IQCB1Q15051 598 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 HAUS3Q68CZ6 603 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 PNMA8AQ86V59 439 aaPredicted RBP19.05■□□□□ 0.64
COL27A1-201ENST00000356083 RNF10Q8N5U6 811 aaKnown RBP19.05■□□□□ 0.64
COL27A1-201ENST00000356083 ARFGAP2Q8N6H7 521 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 SLC5A4Q9NY91 659 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 CEP104O60308 925 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 DBN1Q16643 649 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 TRIM35Q9UPQ4 493 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 hCG_1642624A0A1W2PR95 340 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 NIM1KQ8IY84 436 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 STK24Q9Y6E0 443 aa19.05■□□□□ 0.64
COL27A1-201ENST00000356083 MBD4O95243 580 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 MEIS3Q99687 375 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 NLRX1Q86UT6 975 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 NCAPG2Q86XI2 1143 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 ANKRD2Q9GZV1 360 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 VCX3AQ9NNX9 186 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 ABCB4P21439 1286 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 CYP2J2P51589 502 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 PPP2R3AQ06190 1150 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 PCDHB13Q9Y5F0 798 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 ARHGAP4P98171 946 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 TBCCQ15814 346 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 NDUFAB1O14561 156 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 DKC1O60832 514 aaKnown RBP eCLIP19.04■□□□□ 0.647e-7■□□□□ 10.2
COL27A1-201ENST00000356083 APOEP02649 317 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 DISC1Q9NRI5 854 aa19.04■□□□□ 0.64
COL27A1-201ENST00000356083 ANGPTL8Q6UXH0 198 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 CSGALNACT2Q8N6G5 542 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 TBC1D10BQ4KMP7 808 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-201ENST00000356083 KIF11P52732 1056 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 TFCP2Q12800 502 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 HAUS8Q9BT25 410 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 GGA1Q9UJY5 639 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-201ENST00000356083 GNGT2O14610 69 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 CAVIN2O95810 425 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 MKRN3Q13064 507 aaKnown RBP19.03■□□□□ 0.64
COL27A1-201ENST00000356083 ZNF449Q6P9G9 518 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 DEPTORQ8TB45 409 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 SLITRK6Q9H5Y7 841 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 IL15P40933 162 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-201ENST00000356083 ARHGAP24Q8N264 748 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
COL27A1-201ENST00000356083 S100BP04271 92 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-201ENST00000356083 DDX17Q92841 729 aaKnown RBP19.02■□□□□ 0.64
COL27A1-201ENST00000356083 CDCA7Q9BWT1 371 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-201ENST00000356083 OTUD6AQ7L8S5 288 aa19.02■□□□□ 0.64
COL27A1-201ENST00000356083 SLC7A5P2Q9GIP4 190 aa19.02■□□□□ 0.64
COL27A1-201ENST00000356083 SYF2O95926 243 aaKnown RBP19.02■□□□□ 0.64
COL27A1-201ENST00000356083 SERPINB6P35237 376 aa19.02■□□□□ 0.64
COL27A1-201ENST00000356083 N4BP2L2Q92802 583 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-201ENST00000356083 PLCB1Q9NQ66 1216 aa19.02■□□□□ 0.64
COL27A1-201ENST00000356083 CCDC93Q567U6 631 aa19.02■□□□□ 0.64
COL27A1-201ENST00000356083 HELLSQ9NRZ9 838 aa19.02■□□□□ 0.64
COL27A1-201ENST00000356083 MAD1L1Q9Y6D9 718 aa19.02■□□□□ 0.64
COL27A1-201ENST00000356083 PFDN6O15212 129 aa19.02■□□□□ 0.63
COL27A1-201ENST00000356083 CLNS1AP54105 237 aaKnown RBP19.02■□□□□ 0.63
COL27A1-201ENST00000356083 VWA3BQ502W6 1294 aa19.02■□□□□ 0.63
COL27A1-201ENST00000356083 IGSF22Q8N9C0 903 aa19.02■□□□□ 0.63
COL27A1-201ENST00000356083 FAM71BQ8TC56 605 aa19.02■□□□□ 0.63
COL27A1-201ENST00000356083 ARMT1Q9H993 441 aa19.02■□□□□ 0.63
COL27A1-201ENST00000356083 DLATP10515 647 aaKnown RBP19.02■□□□□ 0.63
COL27A1-201ENST00000356083 B4GALNT4Q76KP1 1039 aa19.02■□□□□ 0.63
COL27A1-201ENST00000356083 SUGT1Q9Y2Z0 365 aa19.02■□□□□ 0.63
COL27A1-201ENST00000356083 AFAP1L1Q8TED9 768 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms