RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 GABPAQ06546 454 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 DDX23Q9BUQ8 820 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 PAXBP1Q9Y5B6 917 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 GIPC1O14908 333 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 FBXO11Q86XK2 927 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
FN1-204ENST00000356005 CCT6BQ92526 530 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 ABCC3O15438 1527 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
FN1-204ENST00000356005 CCPG1Q9ULG6 757 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 USPL1Q5W0Q7 1092 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 TMED8Q6PL24 325 aaPredicted RBP12.55□□□□□ -0.4
FN1-204ENST00000356005 CNGA4Q8IV77 575 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 TSPYL6Q8N831 410 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 USP6P35125 1406 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 INF2Q27J81 1249 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 SRGAP1Q7Z6B7 1085 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 UBL4BQ8N7F7 174 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 SNX21Q969T3 373 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 MTRF1LQ9UGC7 380 aaKnown RBP12.55□□□□□ -0.4
FN1-204ENST00000356005 AK2P54819 239 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 ZNF174Q15697 407 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 ZSCAN30Q86W11 494 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 PSTPIP2Q9H939 334 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 NRBP2Q9NSY0 501 aa12.55□□□□□ -0.4
FN1-204ENST00000356005 ATP5JP18859 108 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 TTC14Q96N46 770 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
FN1-204ENST00000356005 ALDH3A1P30838 453 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 TTC38Q5R3I4 469 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 CCDC63Q8NA47 563 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 CNPY2Q9Y2B0 182 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 LUC7L2Q9Y383 392 aaKnown RBP12.54□□□□□ -0.4
FN1-204ENST00000356005 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 ALAS1P13196 640 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 TFDP1Q14186 410 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 PLEKHM2Q8IWE5 1019 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
FN1-204ENST00000356005 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 ADCY5O95622 1261 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 ANO6Q4KMQ2 910 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 FAM204AQ9H8W3 233 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 GJC1P36383 396 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 ASPRV1Q53RT3 343 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 TXKP42681 527 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 PPP1R7Q15435 360 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 APOBEC3FQ8IUX4 373 aaKnown RBP12.54□□□□□ -0.4
FN1-204ENST00000356005 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 TRPM1Q7Z4N2 1603 aa12.54□□□□□ -0.4
FN1-204ENST00000356005 CIAPIN1Q6FI81 312 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 SNX29Q8TEQ0 813 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 FOSP01100 380 aaPredicted RBP12.53□□□□□ -0.4
FN1-204ENST00000356005 RXRAP19793 462 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 PPARAQ07869 468 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 AFAP1L2Q8N4X5 818 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 PLEKHG2Q9H7P9 1386 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 IQCA1LA6NCM1 817 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 CIAO1O76071 339 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 TTLL1O95922 423 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 TNNC2P02585 160 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 IQCDQ96DY2 449 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 TPCN1Q9ULQ1 816 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 USP19O94966 1318 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 SLC27A2O14975 620 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 CUTAO60888 179 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 GMNNO75496 209 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 POLGP54098 1239 aaPredicted RBP12.53□□□□□ -0.4
FN1-204ENST00000356005 CHRNDQ07001 517 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
FN1-204ENST00000356005 KRT19P08727 400 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 TNFAIP3P21580 790 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 KRT9P35527 623 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 GNG11P61952 73 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 PPP2R5AQ15172 486 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 ARHGEF25Q86VW2 580 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 CACYBPQ9HB71 228 aaKnown RBP12.53□□□□□ -0.4
FN1-204ENST00000356005 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
FN1-204ENST00000356005 POLR3GO15318 223 aaPredicted RBP12.53□□□□□ -0.4
FN1-204ENST00000356005 IGHDP01880 384 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms