RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 FAM196BA6NMK8 535 aa15.88■□□□□ 0.13
HOXA1-202ENST00000355633 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
HOXA1-202ENST00000355633 F13A1P00488 732 aa15.88■□□□□ 0.13
HOXA1-202ENST00000355633 AKR1B1P15121 316 aa15.88■□□□□ 0.13
HOXA1-202ENST00000355633 FAM83AQ86UY5 434 aa15.88■□□□□ 0.13
HOXA1-202ENST00000355633 GPC2Q8N158 579 aa15.88■□□□□ 0.13
HOXA1-202ENST00000355633 CCDC17Q96LX7 622 aa15.88■□□□□ 0.13
HOXA1-202ENST00000355633 RBM28Q9NW13 759 aaKnown RBP15.88■□□□□ 0.13
HOXA1-202ENST00000355633 H3BQV1 296 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 EGFRP00533 1210 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 SLURP2P0DP57 97 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 IFNAR1P17181 557 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 IFFO2Q5TF58 517 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 CDC37L1Q7L3B6 337 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 METTL16Q86W50 562 aaKnown RBP15.87■□□□□ 0.13
HOXA1-202ENST00000355633 PNMA1Q8ND90 353 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
HOXA1-202ENST00000355633 PHKBQ93100 1093 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 CEP95Q96GE4 821 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 H7C1D1 291 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 SSRP1Q08945 709 aaKnown RBP15.87■□□□□ 0.13
HOXA1-202ENST00000355633 SAMD7Q7Z3H4 446 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 TMEM47Q9BQJ4 181 aa15.87■□□□□ 0.13
HOXA1-202ENST00000355633 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.87■□□□□ 0.13
HOXA1-202ENST00000355633 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
HOXA1-202ENST00000355633 MPHOSPH10O00566 681 aaKnown RBP15.86■□□□□ 0.13
HOXA1-202ENST00000355633 TNNI2P48788 182 aa15.86■□□□□ 0.13
HOXA1-202ENST00000355633 KIF4BQ2VIQ3 1234 aa15.86■□□□□ 0.13
HOXA1-202ENST00000355633 TBC1D10BQ4KMP7 808 aaPredicted RBP15.86■□□□□ 0.13
HOXA1-202ENST00000355633 TATDN1Q6P1N9 297 aa15.86■□□□□ 0.13
HOXA1-202ENST00000355633 SLC26A6Q9BXS9 759 aa15.86■□□□□ 0.13
HOXA1-202ENST00000355633 GREB1LQ9C091 1923 aaPredicted RBP15.86■□□□□ 0.13
HOXA1-202ENST00000355633 IGKV6D-41A0A0C4DH26 115 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 FMNL1O95466 1100 aaPredicted RBP15.85■□□□□ 0.13
HOXA1-202ENST00000355633 NOVP48745 357 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 FOSBP53539 338 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 CERKLQ49MI3 558 aaPredicted RBP15.85■□□□□ 0.13
HOXA1-202ENST00000355633 TRIM22Q8IYM9 498 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 MTMR4Q9NYA4 1195 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 HERC5Q9UII4 1024 aaKnown RBP15.85■□□□□ 0.13
HOXA1-202ENST00000355633 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 GOLGA6L22H0YM25 854 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 TOP1P11387 765 aaKnown RBP15.85■□□□□ 0.13
HOXA1-202ENST00000355633 KIF5BP33176 963 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 TNFAIP1Q13829 316 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 MAP3K14Q99558 947 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 TMEM39BQ9GZU3 492 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
HOXA1-202ENST00000355633 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 MCTP1Q6DN14 999 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 NBPF11Q86T75 865 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 CMTR1Q8N1G2 835 aaKnown RBP15.84■□□□□ 0.13
HOXA1-202ENST00000355633 CCDC82Q8N4S0 544 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 C8orf76Q96K31 380 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.84■□□□□ 0.13
HOXA1-202ENST00000355633 GPR162Q16538 588 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 PPP4R3BQ5MIZ7 849 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 FERMT3Q86UX7 667 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 WASF1Q92558 559 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 ALG1Q9BT22 464 aa15.84■□□□□ 0.13
HOXA1-202ENST00000355633 PLEKHA8P1O95397 391 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 TTLL1O95922 423 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 GUCY1B3Q02153 619 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 RASA3Q14644 834 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 GRM4Q14833 912 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 FOXD4L6Q3SYB3 417 aaPredicted RBP15.83■□□□□ 0.12
HOXA1-202ENST00000355633 FOXD4L3Q6VB84 417 aaPredicted RBP15.83■□□□□ 0.12
HOXA1-202ENST00000355633 CHAMP1Q96JM3 812 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 RNF26Q9BY78 433 aaPredicted RBP15.83■□□□□ 0.12
HOXA1-202ENST00000355633 HACL1Q9UJ83 578 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 MYH6P13533 1939 aa15.83■□□□□ 0.12
HOXA1-202ENST00000355633 DDNO94850 711 aaPredicted RBP15.82■□□□□ 0.12
HOXA1-202ENST00000355633 ABCB5Q2M3G0 1257 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 CLIP2Q9UDT6 1046 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 ASTN2O75129 1339 aaPredicted RBP15.82■□□□□ 0.12
HOXA1-202ENST00000355633 GDF11O95390 407 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 DEXIO95424 95 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 AKAP17AQ02040 695 aaKnown RBP15.82■□□□□ 0.12
HOXA1-202ENST00000355633 FUT2Q10981 343 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 TMEM179Q6ZVK1 233 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 CLEC10AQ8IUN9 316 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 CDAN1Q8IWY9 1227 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 RGS22Q8NE09 1264 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 FBXO18Q8NFZ0 1043 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 AIFM3Q96NN9 605 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 PGAP2Q9UHJ9 254 aa15.82■□□□□ 0.12
HOXA1-202ENST00000355633 MYH4Q9Y623 1939 aa15.81■□□□□ 0.12
HOXA1-202ENST00000355633 TBC1D12O60347 775 aa15.81■□□□□ 0.12
HOXA1-202ENST00000355633 EPS15P42566 896 aa15.81■□□□□ 0.12
HOXA1-202ENST00000355633 GNAQP50148 359 aa15.81■□□□□ 0.12
HOXA1-202ENST00000355633 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
HOXA1-202ENST00000355633 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
HOXA1-202ENST00000355633 TRPM4Q8TD43 1214 aa15.81■□□□□ 0.12
HOXA1-202ENST00000355633 ZSCAN16Q9H4T2 348 aaPredicted RBP15.81■□□□□ 0.12
HOXA1-202ENST00000355633 KANSL2Q9H9L4 492 aa15.81■□□□□ 0.12
HOXA1-202ENST00000355633 MAD2L2Q9UI95 211 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms