RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 NR5A1Q13285 461 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 NCAPHQ15003 741 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 CCDC93Q567U6 631 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 LRRC31Q6UY01 552 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 GRAMD1CQ8IYS0 662 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 KAT2BQ92831 832 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 PLA2G12BQ9BX93 195 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 LRP2BPQ9P2M1 347 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 SLC4A4Q9Y6R1 1079 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 BAZ2BQ9UIF8 2168 aaKnown RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 MYO5AQ9Y4I1 1855 aaKnown RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 CYP19A1P11511 503 aaPredicted RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 MAP3K12Q12852 859 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 UBE3CQ15386 1083 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 PUM3Q15397 648 aaKnown RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 LCORLQ8N3X6 602 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 FBXL16Q8N461 479 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 VGLL2Q8N8G2 317 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 JMYQ8N9B5 988 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 DHX58Q96C10 678 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 PCDHA5Q9Y5H7 936 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 SLIT2O94813 1529 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 TMEM232C9JQI7 657 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 EXOC5O00471 708 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 NAIF1Q69YI7 327 aaPredicted RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 MFSD6Q6ZSS7 791 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 TRMT44Q8IYL2 757 aaKnown RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 SDR42E1Q8WUS8 393 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 GOLGA1Q92805 767 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 FAM217BQ9NTX9 383 aaPredicted RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 FANCLQ9NW38 375 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 KCNH3Q9ULD8 1083 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
SMG6-202ENST00000354901 DIS3L2Q8IYB7 885 aaKnown RBP10.62□□□□□ -0.71
SMG6-202ENST00000354901 LPIN2Q92539 896 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMG6-202ENST00000354901 IRX2Q9BZI1 471 aaPredicted RBP10.62□□□□□ -0.71
SMG6-202ENST00000354901 SAMM50Q9Y512 469 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 MYH15Q9Y2K3 1946 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 SSBP05455 408 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMG6-202ENST00000354901 SLC5A1P13866 664 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 PTPAQ15257 358 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 NTRK3Q16288 839 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 METTL16Q86W50 562 aaKnown RBP10.62□□□□□ -0.71
SMG6-202ENST00000354901 FOXP4Q8IVH2 680 aaPredicted RBP10.62□□□□□ -0.71
SMG6-202ENST00000354901 GPR161Q8N6U8 529 aaKnown RBP10.62□□□□□ -0.71
SMG6-202ENST00000354901 SGSM3Q96HU1 749 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 LZTFL1Q9NQ48 299 aa10.62□□□□□ -0.71
SMG6-202ENST00000354901 FANCGO15287 622 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 HNRNPH1P31943 449 aaKnown RBP10.61□□□□□ -0.71
SMG6-202ENST00000354901 SAFBQ15424 915 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMG6-202ENST00000354901 SUSD4Q5VX71 490 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 BARGINQ6ZT62 677 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 EFCAB13Q8IY85 973 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 CCDC150Q8NCX0 1101 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 RIN2Q8WYP3 895 aaPredicted RBP10.61□□□□□ -0.71
SMG6-202ENST00000354901 N4BP2L2Q92802 583 aaPredicted RBP10.61□□□□□ -0.71
SMG6-202ENST00000354901 TMEM87BQ96K49 555 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 POLD4Q9HCU8 107 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.61□□□□□ -0.71
SMG6-202ENST00000354901 PARP3Q9Y6F1 533 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 SPATA31A1Q5TZJ5 1347 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 TCRBV5S4A2TA0A5A2 114 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 PRDM1O75626 825 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 UQCRFS1P1P0C7P4 283 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 MYL5Q02045 173 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 PDE4BQ07343 736 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 SLC4A8Q2Y0W8 1093 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 CEP57Q86XR8 500 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 CAPN7Q9Y6W3 813 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 BCL9O00512 1426 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 ERICH2A1L162 156 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 GSG1L2A8MUP6 293 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 POLR2DO15514 142 aaKnown RBP10.61□□□□□ -0.71
SMG6-202ENST00000354901 PAX7P23759 505 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 WTAPQ15007 396 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 RTN1Q16799 776 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 AKNAD1Q5T1N1 836 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 OXER1Q8TDS5 423 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 SMARCC1Q92922 1105 aaPredicted RBP10.61□□□□□ -0.71
SMG6-202ENST00000354901 OSBPL5Q9H0X9 879 aaPredicted RBP10.61□□□□□ -0.71
SMG6-202ENST00000354901 CD248Q9HCU0 757 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 ABCB6Q9NP58 842 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 CDHR2Q9BYE9 1310 aa10.61□□□□□ -0.71
SMG6-202ENST00000354901 CYP2D7A0A087X1C5 515 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 IRF6O14896 467 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 AKAP17AQ02040 695 aaKnown RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 KLHL10Q6JEL2 608 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 USP49Q70CQ1 688 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 TICAM2Q86XR7 235 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 MAP3K14Q99558 947 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 PCDHB6Q9Y5E3 794 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 FAM205CA6NFA0 338 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 SKAP2O75563 359 aaPredicted RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 HDXQ7Z353 690 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 NOSTRINQ8IVI9 506 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms