RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 ADGRA1Q86SQ6 560 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 IQCA1Q86XH1 822 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 ENAHQ8N8S7 591 aaPredicted RBP13.8□□□□□ -0.2
DDX4-201ENST00000353507 SPATA20Q8TB22 786 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
DDX4-201ENST00000353507 EPSTI1Q96J88 318 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 WDR24Q96S15 920 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 DESI2Q9BSY9 194 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 RBM28Q9NW13 759 aaKnown RBP13.8□□□□□ -0.2
DDX4-201ENST00000353507 ANAPC4Q9UJX5 808 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 DUOX1Q9NRD9 1551 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 LAMB2P55268 1798 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 CCDC175P0C221 793 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 PNMA6AP0CW24 399 aaPredicted RBP13.8□□□□□ -0.2
DDX4-201ENST00000353507 STX17P56962 302 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 PPP2R3AQ06190 1150 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
DDX4-201ENST00000353507 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
DDX4-201ENST00000353507 FERMT2Q96AC1 680 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 PHF20Q9BVI0 1012 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 FHOD1Q9Y613 1164 aa13.8□□□□□ -0.2
DDX4-201ENST00000353507 FILIP1LQ4L180 1135 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 TEX35Q5T0J7 233 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 SPATA1Q5VX52 437 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 MED15Q96RN5 788 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 ST7Q9NRC1 585 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 V9GY48 417 aaPredicted RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 ZNF335Q9H4Z2 1342 aaPredicted RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 PRPF3O43395 683 aaKnown RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 PKN1Q16512 942 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 IGSF22Q8N9C0 903 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 CCDC12Q8WUD4 166 aaPredicted RBP13.79□□□□□ -0.2
DDX4-201ENST00000353507 PAGE5Q96GU1 130 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 CTAGE1Q96RT6 745 aa13.79□□□□□ -0.2
DDX4-201ENST00000353507 A0A087X0B3 334 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 PLEKHA8P1O95397 391 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 CALM1P0DP23 149 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 CALM2P0DP24 149 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 CALM3P0DP25 149 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 MRFAP1Q9Y605 127 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 TEX33O43247 280 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 NTSR2O95665 410 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 CASP1P29466 404 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 GYG1P46976 350 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 MAP3K9P80192 1104 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 EARS2Q5JPH6 523 aaKnown RBP13.78□□□□□ -0.2
DDX4-201ENST00000353507 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
DDX4-201ENST00000353507 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 GSDMAQ96QA5 445 aa13.78□□□□□ -0.2
DDX4-201ENST00000353507 CYP2D7A0A087X1C5 515 aa13.77□□□□□ -0.2
DDX4-201ENST00000353507 SMIM22K7EJ46 135 aa13.77□□□□□ -0.2
DDX4-201ENST00000353507 ZNF174Q15697 407 aa13.77□□□□□ -0.2
DDX4-201ENST00000353507 CPLX3Q8WVH0 158 aa13.77□□□□□ -0.2
DDX4-201ENST00000353507 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.2
DDX4-201ENST00000353507 SOWAHDA6NJG2 315 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 ZRANB2O95218 330 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX4-201ENST00000353507 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 DYNLL1P63167 89 aaKnown RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 MTF1Q14872 753 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 KIFC2Q96AC6 838 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 ZNF804BA4D1E1 1349 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 BAZ2BQ9UIF8 2168 aaKnown RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 BCL9LQ86UU0 1499 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 DDAH1O94760 285 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 DPYDQ12882 1025 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 CUL4BQ13620 913 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 CAVIN4Q5BKX8 364 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 RIOK1Q9BRS2 568 aaKnown RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 BRIP1Q9BX63 1249 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 MRPL44Q9H9J2 332 aaKnown RBP13.77□□□□□ -0.21
DDX4-201ENST00000353507 LZTFL1Q9NQ48 299 aa13.77□□□□□ -0.21
DDX4-201ENST00000353507 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 CACNA1SQ13698 1873 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 MYH8P13535 1937 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 SEC31AO94979 1220 aaKnown RBP13.76□□□□□ -0.21
DDX4-201ENST00000353507 FAM193AP78312 1265 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 RBL2Q08999 1139 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 FUT2Q10981 343 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 CREBRFQ8IUR6 639 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 GOLGA1Q92805 767 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 CTNND2Q9UQB3 1225 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 SEMA3EO15041 775 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 PCP11498 1178 aaKnown RBP13.76□□□□□ -0.21
DDX4-201ENST00000353507 ADD3Q9UEY8 706 aaKnown RBP13.76□□□□□ -0.21
DDX4-201ENST00000353507 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms