RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NCAPH2Q6IBW4 605 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 NUTM2AQ8IVF1 878 aaPredicted RBP21.12■□□□□ 0.97
SCARF1-202ENST00000348987 ENOX1Q8TC92 643 aaKnown RBP21.12■□□□□ 0.97
SCARF1-202ENST00000348987 MAP3K14Q99558 947 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 TUBB2BQ9BVA1 445 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 TRMT112Q9UI30 125 aaKnown RBP21.12■□□□□ 0.97
SCARF1-202ENST00000348987 ZBTB1Q9Y2K1 713 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 PRR29P0C7W0 189 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 PSEN1P49768 467 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 TRDNQ13061 729 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 SWT1Q5T5J6 900 aaKnown RBP21.12■□□□□ 0.97
SCARF1-202ENST00000348987 RASGRP2Q7LDG7 609 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 IGSF22Q8N9C0 903 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 ACRBPQ8NEB7 543 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 KAT2BQ92831 832 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 LIG3P49916 1009 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 PIP4K2BP78356 416 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 PPFIBP1Q86W92 1011 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 NAPGQ99747 312 aaPredicted RBP21.11■□□□□ 0.97
SCARF1-202ENST00000348987 ALG1Q9BT22 464 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 ANKRD18BA2A2Z9 1011 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 EXOC5O00471 708 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 PDE8BO95263 885 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 ADAMTS2O95450 1211 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 PDE6AP16499 860 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 METAP2P50579 478 aaKnown RBP eCLIP21.11■□□□□ 0.97
SCARF1-202ENST00000348987 EIF5P55010 431 aaKnown RBP21.11■□□□□ 0.97
SCARF1-202ENST00000348987 AKAP17AQ02040 695 aaKnown RBP21.11■□□□□ 0.97
SCARF1-202ENST00000348987 APOA5Q6Q788 366 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 CCDC91Q7Z6B0 441 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 AKAP11Q9UKA4 1901 aa21.11■□□□□ 0.97
SCARF1-202ENST00000348987 A0A1B0GTH6 734 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 SH2B2O14492 632 aaPredicted RBP21.1■□□□□ 0.97
SCARF1-202ENST00000348987 ERLIN2O94905 339 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 WHAMMP3Q1A5X7 153 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 GDAP1L1Q96MZ0 367 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 HOOK1Q9UJC3 728 aaKnown RBP21.1■□□□□ 0.97
SCARF1-202ENST00000348987 POSTNQ15063 836 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 KRT40Q6A162 431 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 WDR93Q6P2C0 686 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 GRAMD1CQ8IYS0 662 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 NAA15Q9BXJ9 866 aaKnown RBP21.1■□□□□ 0.97
SCARF1-202ENST00000348987 TACC3Q9Y6A5 838 aa21.1■□□□□ 0.97
SCARF1-202ENST00000348987 MYO5AQ9Y4I1 1855 aaKnown RBP21.1■□□□□ 0.97
SCARF1-202ENST00000348987 AARSP49588 968 aaKnown RBP eCLIP21.09■□□□□ 0.97
SCARF1-202ENST00000348987 MLKLQ8NB16 471 aa21.09■□□□□ 0.97
SCARF1-202ENST00000348987 ZMYM6O95789 1325 aa21.09■□□□□ 0.97
SCARF1-202ENST00000348987 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
SCARF1-202ENST00000348987 ACSBG1Q96GR2 724 aa21.09■□□□□ 0.97
SCARF1-202ENST00000348987 CEP89Q96ST8 783 aa21.09■□□□□ 0.97
SCARF1-202ENST00000348987 CDHR2Q9BYE9 1310 aa21.09■□□□□ 0.97
SCARF1-202ENST00000348987 TCRBV5S4A2TA0A5A2 114 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 RANBP6O60518 1105 aaKnown RBP21.08■□□□□ 0.97
SCARF1-202ENST00000348987 CYP19A1P11511 503 aaPredicted RBP21.08■□□□□ 0.97
SCARF1-202ENST00000348987 CASP14P31944 242 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 FAM217BQ9NTX9 383 aaPredicted RBP21.08■□□□□ 0.97
SCARF1-202ENST00000348987 UBN2Q6ZU65 1347 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 TUBBP07437 444 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 CCT5P48643 541 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 CTDSPL2Q05D32 466 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 IGDCC4Q8TDY8 1250 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 VIPAS39Q9H9C1 493 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 EPB41L4AQ9HCS5 686 aaPredicted RBP21.08■□□□□ 0.97
SCARF1-202ENST00000348987 HPCAL4Q9UM19 191 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 MYO6Q9UM54 1294 aa21.08■□□□□ 0.97
SCARF1-202ENST00000348987 ABCC12Q96J65 1359 aa21.08■□□□□ 0.96
SCARF1-202ENST00000348987 GSCP56915 257 aaPredicted RBP21.08■□□□□ 0.96
SCARF1-202ENST00000348987 STK11IPQ8N1F8 1099 aa21.08■□□□□ 0.96
SCARF1-202ENST00000348987 CTCFLQ8NI51 663 aaPredicted RBP21.08■□□□□ 0.96
SCARF1-202ENST00000348987 STRBPQ96SI9 672 aaKnown RBP21.08■□□□□ 0.96
SCARF1-202ENST00000348987 MNAT1P51948 309 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 MORC3Q14149 939 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 UBE3CQ15386 1083 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 NTRK3Q16288 839 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 CCDC148Q8NFR7 591 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 RABEP2Q9H5N1 569 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 CXorf56Q9H5V9 222 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.07■□□□□ 0.96
SCARF1-202ENST00000348987 SERTAD1Q9UHV2 236 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 DACH1Q9UI36 760 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 POLR2DO15514 142 aaKnown RBP21.07■□□□□ 0.96
SCARF1-202ENST00000348987 MFAP3LO75121 409 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 GRIN1Q05586 938 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 CT47A1Q5JQC4 288 aaPredicted RBP21.07■□□□□ 0.96
SCARF1-202ENST00000348987 FBXW10Q5XX13 1052 aa21.07■□□□□ 0.96
SCARF1-202ENST00000348987 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.07■□□□□ 0.96
SCARF1-202ENST00000348987 APTXQ7Z2E3 356 aaKnown RBP21.07■□□□□ 0.96
SCARF1-202ENST00000348987 TTF2Q9UNY4 1162 aaKnown RBP21.07■□□□□ 0.96
SCARF1-202ENST00000348987 GGCXP38435 758 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 AIDAQ96BJ3 306 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 LY9Q9HBG7 655 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 WDR19Q8NEZ3 1342 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 SARSP49591 514 aaKnown RBP21.06■□□□□ 0.96
SCARF1-202ENST00000348987 FXR1P51114 621 aaKnown RBP eCLIP21.06■□□□□ 0.96
SCARF1-202ENST00000348987 NFXL1Q6ZNB6 911 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 KAT14Q9H8E8 782 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 SEC31BQ9NQW1 1179 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 ZSWIM5Q9P217 1185 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 FAM169AQ9Y6X4 670 aa21.06■□□□□ 0.96
SCARF1-202ENST00000348987 ZC3H4Q9UPT8 1303 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms