RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DNAJC10Q8IXB1 793 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 NCOA5Q9HCD5 579 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 BATF3Q9NR55 127 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 TCP10Q12799 353 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 USP37Q86T82 979 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 SMC6Q96SB8 1091 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 SMIM23A6NLE4 172 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 OPHN1O60890 802 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 GNA11P29992 359 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
SMARCE1-202ENST00000348513 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 A0A1B0GVL5 298 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 TYRO3Q06418 890 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 IMPG2Q9BZV3 1241 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 PCYT1AP49585 367 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 ZNF131P52739 623 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 IFI16Q16666 785 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 CRYMQ14894 314 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 PDE11AQ9HCR9 933 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 CCDC87Q9NVE4 849 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 NUB1Q9Y5A7 615 aa12.3□□□□□ -0.44
SMARCE1-202ENST00000348513 VAV2P52735 878 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 CAPZA3Q96KX2 299 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 SLC27A2O14975 620 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 KARSQ15046 597 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 CENPKQ9BS16 269 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 ENO4A6NNW6 628 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 DRC3Q9H069 523 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 FERMT1Q9BQL6 677 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 TRIM66O15016 1216 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 CCDC170Q8IYT3 715 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 PLEKHA4Q9H4M7 779 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 STK38LQ9Y2H1 464 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 IKBKGQ9Y6K9 419 aa12.29□□□□□ -0.44
SMARCE1-202ENST00000348513 GPAA1O43292 621 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 NCBP1Q09161 790 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 GNPTABQ3T906 1256 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 HHATQ5VTY9 493 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 PICK1Q9NRD5 415 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 USP21Q9UK80 565 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 TSC22D4Q9Y3Q8 395 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 DDX39AO00148 427 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 CCNT1O60563 726 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 RAPGEF1Q13905 1077 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 GSTA5Q7RTV2 222 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 ARL10Q8N8L6 244 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 RNF217Q8TC41 542 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 MTUS1Q9ULD2 1270 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 MAEAQ7L5Y9 396 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 LARGE2Q8N3Y3 721 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 SREK1Q8WXA9 508 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 HPDP32754 393 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 ZNF75DP51815 510 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 SPAG1Q07617 926 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 NOP53Q9NZM5 478 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 IFNKQ9P0W0 207 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 SERPINA10Q9UK55 444 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 PPP1R9AQ9ULJ8 1098 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 LZTFL1Q9NQ48 299 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
SMARCE1-202ENST00000348513 hCG_1642624A0A1W2PR95 340 aa12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 APBA3O96018 575 aa12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 STMN1P16949 149 aa12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 CCT6AP40227 531 aaKnown RBP12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 ZNF569Q5MCW4 686 aa12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 PUS7Q96PZ0 661 aaKnown RBP12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 OSBPL9Q96SU4 736 aa12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 MAPK8IP1Q9UQF2 711 aa12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.44
SMARCE1-202ENST00000348513 H0YIN7 160 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 SEC31AO94979 1220 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 CLTAP09496 248 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 MYCLP12524 364 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 USH1GQ495M9 461 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 OLFML1Q6UWY5 402 aa12.27□□□□□ -0.45
SMARCE1-202ENST00000348513 MAPKAPK5Q8IW41 473 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms