RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 KIF3CO14782 793 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 MFAP3LO75121 409 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 SMTNP53814 917 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 ZNF473Q8WTR7 871 aaKnown RBP18.26■□□□□ 0.51
MBD1-204ENST00000347968 PANX2Q96RD6 677 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 RUFY1Q96T51 708 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
MBD1-204ENST00000347968 GYPCP04921 128 aa18.25■□□□□ 0.51
MBD1-204ENST00000347968 MRPL12P52815 198 aaKnown RBP18.25■□□□□ 0.51
MBD1-204ENST00000347968 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
MBD1-204ENST00000347968 GPIHBP1Q8IV16 184 aa18.25■□□□□ 0.51
MBD1-204ENST00000347968 LRRC59Q96AG4 307 aaKnown RBP18.25■□□□□ 0.51
MBD1-204ENST00000347968 BORCS6Q96GS4 357 aa18.25■□□□□ 0.51
MBD1-204ENST00000347968 PPANQ9NQ55 473 aaKnown RBP18.25■□□□□ 0.51
MBD1-204ENST00000347968 LSP1P33241 339 aa18.25■□□□□ 0.51
MBD1-204ENST00000347968 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
MBD1-204ENST00000347968 KCNH3Q9ULD8 1083 aa18.25■□□□□ 0.51
MBD1-204ENST00000347968 GRIK3Q13003 919 aa18.24■□□□□ 0.51
MBD1-204ENST00000347968 ARMC2Q8NEN0 867 aa18.24■□□□□ 0.51
MBD1-204ENST00000347968 RIPOR2Q9Y4F9 1068 aa18.24■□□□□ 0.51
MBD1-204ENST00000347968 E7EVH7 732 aa18.24■□□□□ 0.51
MBD1-204ENST00000347968 HPDP32754 393 aaPredicted RBP18.24■□□□□ 0.51
MBD1-204ENST00000347968 USPL1Q5W0Q7 1092 aa18.24■□□□□ 0.51
MBD1-204ENST00000347968 EHD2Q9NZN4 543 aa18.24■□□□□ 0.51
MBD1-204ENST00000347968 CPSF2Q9P2I0 782 aaKnown RBP18.24■□□□□ 0.51
MBD1-204ENST00000347968 UBE2Q2LH0YL09 131 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 ERCC3P19447 782 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 NNTQ13423 1086 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 THEMIS2Q5TEJ8 643 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 TRAPPC11Q7Z392 1133 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 NUP88Q99567 741 aaPredicted RBP18.23■□□□□ 0.51
MBD1-204ENST00000347968 SPATS2LQ9NUQ6 558 aaKnown RBP18.23■□□□□ 0.51
MBD1-204ENST00000347968 TTF2Q9UNY4 1162 aaKnown RBP18.23■□□□□ 0.51
MBD1-204ENST00000347968 SAR1BQ9Y6B6 198 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 ARHGEF10O15013 1369 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 DNM1LO00429 736 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
MBD1-204ENST00000347968 MYO1EQ12965 1108 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 SLC39A14Q15043 492 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
MBD1-204ENST00000347968 FUKQ8N0W3 1084 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 SPDYE1Q8NFV5 336 aaPredicted RBP18.23■□□□□ 0.51
MBD1-204ENST00000347968 MICAL1Q8TDZ2 1067 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 BAIAP2L1Q9UHR4 511 aa18.23■□□□□ 0.51
MBD1-204ENST00000347968 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 JAKMIP2Q96AA8 810 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 STAMBPL1Q96FJ0 436 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 CCT8L2Q96SF2 557 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
MBD1-204ENST00000347968 ZNF609O15014 1411 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 GOLGA6L7A0A1B0GV03 622 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 CPLX1O14810 134 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 TACO1Q9BSH4 297 aaKnown RBP18.22■□□□□ 0.51
MBD1-204ENST00000347968 LRRC1Q9BTT6 524 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 YIPF3Q9GZM5 350 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 VPS16Q9H269 839 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 JADE2Q9NQC1 790 aa18.22■□□□□ 0.51
MBD1-204ENST00000347968 MARF1Q9Y4F3 1742 aaKnown RBP18.22■□□□□ 0.51
MBD1-204ENST00000347968 GOLGA8BA8MQT2 603 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 POLR2DO15514 142 aaKnown RBP18.21■□□□□ 0.51
MBD1-204ENST00000347968 TUBBP07437 444 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 LMBR1Q8WVP7 490 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 TATDN2Q93075 761 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 REXO2Q9Y3B8 237 aaKnown RBP18.21■□□□□ 0.51
MBD1-204ENST00000347968 A0A1B0GTH6 734 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 E7EWF7 191 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 KCNQ3O43525 872 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 PSMD2Q13200 908 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 ETAA1Q9NY74 926 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 HPSEQ9Y251 543 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 DUSP10Q9Y6W6 482 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 TLDC1Q6P9B6 456 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 CCDC121Q6ZUS5 278 aa18.21■□□□□ 0.51
MBD1-204ENST00000347968 KLF18A0A0U1RQI7 1052 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 ATF3P18847 181 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
MBD1-204ENST00000347968 ZKSCAN8Q15776 578 aaPredicted RBP18.2■□□□□ 0.5
MBD1-204ENST00000347968 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 MYCBPAPQ8TBZ2 947 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 ZIM3Q96PE6 472 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 L3MBTL1Q9Y468 752 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 MACROD2A1Z1Q3 448 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 AFMP43652 599 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 POSTNQ15063 836 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 CCDC122Q5T0U0 273 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 NLRP14Q86W24 1093 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 SUCLG2Q96I99 432 aa18.2■□□□□ 0.5
MBD1-204ENST00000347968 GOLGA8KD6RF30 607 aa18.19■□□□□ 0.5
MBD1-204ENST00000347968 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
MBD1-204ENST00000347968 GCP02774 474 aa18.19■□□□□ 0.5
MBD1-204ENST00000347968 CXCR5P32302 372 aa18.19■□□□□ 0.5
MBD1-204ENST00000347968 TUBB2AQ13885 445 aa18.19■□□□□ 0.5
MBD1-204ENST00000347968 VPS37DQ86XT2 251 aa18.19■□□□□ 0.5
MBD1-204ENST00000347968 AENQ8WTP8 325 aaKnown RBP18.19■□□□□ 0.5
MBD1-204ENST00000347968 NSMCE1Q8WV22 266 aa18.19■□□□□ 0.5
MBD1-204ENST00000347968 TUBB2BQ9BVA1 445 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms