RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 XAGE2Q96GT9 111 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 OSBPL3Q9H4L5 887 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 STAP2Q9UGK3 403 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 DBNLQ9UJU6 430 aaKnown RBP6.14□□□□□ -1.43
VCAM1-202ENST00000347652 SH3BP1Q9Y3L3 701 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 ARAP2Q8WZ64 1704 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 ZNF804BA4D1E1 1349 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 SHTN1A0MZ66 631 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 FAM196BA6NMK8 535 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 PRSS47A8MTI9 375 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 RAD17O75943 681 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 SLC5A1P13866 664 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 ADORA1P30542 326 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 DPYDQ12882 1025 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 C15orf52Q6ZUT6 534 aaKnown RBP6.14□□□□□ -1.43
VCAM1-202ENST00000347652 GTF3C2Q8WUA4 911 aaPredicted RBP6.14□□□□□ -1.43
VCAM1-202ENST00000347652 MRFAP1L1Q96HT8 127 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 DBNDD2Q9BQY9 259 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 MUC3BQ9H195 1237 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 RRAGCQ9HB90 399 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 AVENQ9NQS1 362 aaPredicted RBP6.14□□□□□ -1.43
VCAM1-202ENST00000347652 GGA1Q9UJY5 639 aa6.14□□□□□ -1.43
VCAM1-202ENST00000347652 DIS3Q9Y2L1 958 aaKnown RBP6.14□□□□□ -1.43
VCAM1-202ENST00000347652 GLTPD2A6NH11 291 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 FZD9O00144 591 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 IFIT1P09914 478 aaKnown RBP6.13□□□□□ -1.43
VCAM1-202ENST00000347652 MX1P20591 662 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 PDE1AP54750 535 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 KIAA2012Q0VF49 1180 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 SERINC3Q13530 473 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 C1QTNF12Q5T7M4 302 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 FAM200AQ8TCP9 573 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 CEP63Q96MT8 703 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 PURBQ96QR8 312 aaKnown RBP6.13□□□□□ -1.43
VCAM1-202ENST00000347652 CLEC11AQ9Y240 323 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 KIF3CO14782 793 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 POTEIP0CG38 1075 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 POTEJP0CG39 1038 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 SKIP12755 728 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 KCNJ4P48050 445 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 NCOA4Q13772 614 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 TKFCQ3LXA3 575 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 PI4K2BQ8TCG2 481 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 SRPK1Q96SB4 655 aaKnown RBP6.13□□□□□ -1.43
VCAM1-202ENST00000347652 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.13□□□□□ -1.43
VCAM1-202ENST00000347652 MXD3Q9BW11 206 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 ENAMQ9NRM1 1142 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 FRMD4BQ9Y2L6 1034 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 GJA3Q9Y6H8 435 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 AOX1Q06278 1338 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 TTC41PQ6P2S7 1318 aa6.13□□□□□ -1.43
VCAM1-202ENST00000347652 IFRD1O00458 451 aaPredicted RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ECE2O60344 883 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 VIL1P09327 827 aaKnown RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ATP5JP18859 108 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 RGS3P49796 1198 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 GUCA2AQ02747 115 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 CXCL9Q07325 125 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 TOMM20Q15388 145 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 OCLNQ16625 522 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 PLPP6Q8IY26 295 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 NIM1KQ8IY84 436 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 FAM84BQ96KN1 310 aaPredicted RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ECHDC1Q9NTX5 307 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 MED23Q9ULK4 1368 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 LZTS3O60299 673 aaPredicted RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 BCAMP50895 628 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 CCDC158Q5M9N0 1113 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 TSHZ3Q63HK5 1081 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 CCDC102BQ68D86 513 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 PPP4R4Q6NUP7 873 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 CC2D1AQ6P1N0 951 aaPredicted RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 PXYLP1Q8TE99 480 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ARNT2Q9HBZ2 717 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 SORBS3O60504 671 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 COPB2P35606 906 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 PHKA1P46020 1223 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 GYG1P46976 350 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 BRDTQ58F21 947 aaPredicted RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 CAVIN4Q5BKX8 364 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 TTC39AQ5SRH9 613 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ZSCAN29Q8IWY8 852 aaPredicted RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 SUPT20HQ8NEM7 779 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 EYA3Q99504 573 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ZC3H12CQ9C0D7 883 aaKnown RBP6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ZHX3Q9H4I2 956 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ZNRF3Q9ULT6 936 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
VCAM1-202ENST00000347652 ESYT3A0FGR9 886 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 PSMD14O00487 310 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 ERC2O15083 957 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 EGFRP00533 1210 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 LDHBP07195 334 aaKnown RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 UQCRFS1P1P0C7P4 283 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 SCP2P22307 547 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 SCNN1DP51172 638 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 GNL2Q13823 731 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms