RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 RNF26Q9BY78 433 aaPredicted RBP24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 GDPD2Q9HCC8 539 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 SIPA1L1O43166 1804 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 DEXIO95424 95 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 KIF5BP33176 963 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 MMP14P50281 582 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 MTMR14Q8NCE2 650 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 PI4KBQ9UBF8 816 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 FIBPO43427 364 aa24.93■■□□□ 1.58
TSPAN3-202ENST00000346495 MBD3O95983 291 aa24.93■■□□□ 1.58
TSPAN3-202ENST00000346495 TRIM29Q14134 588 aa24.93■■□□□ 1.58
TSPAN3-202ENST00000346495 TMTC3Q6ZXV5 915 aa24.93■■□□□ 1.58
TSPAN3-202ENST00000346495 STX8Q9UNK0 236 aa24.93■■□□□ 1.58
TSPAN3-202ENST00000346495 NOVP48745 357 aa24.92■■□□□ 1.58
TSPAN3-202ENST00000346495 AKAP17AQ02040 695 aaKnown RBP24.92■■□□□ 1.58
TSPAN3-202ENST00000346495 RASSF7Q02833 373 aa24.92■■□□□ 1.58
TSPAN3-202ENST00000346495 FAM173BQ6P4H8 233 aa24.92■■□□□ 1.58
TSPAN3-202ENST00000346495 ZSCAN29Q8IWY8 852 aaPredicted RBP24.92■■□□□ 1.58
TSPAN3-202ENST00000346495 AIFM3Q96NN9 605 aa24.92■■□□□ 1.58
TSPAN3-202ENST00000346495 TMEM47Q9BQJ4 181 aa24.92■■□□□ 1.58
TSPAN3-202ENST00000346495 SHMT1P34896 483 aa24.91■■□□□ 1.58
TSPAN3-202ENST00000346495 OTUD7BQ6GQQ9 843 aa24.91■■□□□ 1.58
TSPAN3-202ENST00000346495 FOXP4Q8IVH2 680 aaPredicted RBP24.91■■□□□ 1.58
TSPAN3-202ENST00000346495 CMTR1Q8N1G2 835 aaKnown RBP24.91■■□□□ 1.58
TSPAN3-202ENST00000346495 SCAND2PQ9GZW5 306 aaPredicted RBP24.91■■□□□ 1.58
TSPAN3-202ENST00000346495 ATRNL1Q5VV63 1379 aa24.91■■□□□ 1.58
TSPAN3-202ENST00000346495 DDTLA6NHG4 134 aaPredicted RBP24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 PRPF3O43395 683 aaKnown RBP24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 RPS12P25398 132 aaKnown RBP24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 FUT2Q10981 343 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 ATL3Q6DD88 541 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 CCDC82Q8N4S0 544 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 CEP95Q96GE4 821 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 CCDC17Q96LX7 622 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 ZNF70Q9UC06 446 aaPredicted RBP24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 PLEKHA8P1O95397 391 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 TOP1P11387 765 aaKnown RBP24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 AKR1B1P15121 316 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 GSE1Q14687 1217 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 GRM4Q14833 912 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 KRT40Q6A162 431 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 SH3BP5LQ7L8J4 393 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 TRIM34Q9BYJ4 488 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 CFAP45Q9UL16 551 aa24.9■■□□□ 1.58
TSPAN3-202ENST00000346495 GNAQP50148 359 aa24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 SPDYE2Q495Y8 402 aa24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 BRAPQ7Z569 592 aa24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 GPT2Q8TD30 523 aa24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 ZNF396Q96N95 335 aaPredicted RBP24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 GJB4Q9NTQ9 266 aa24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 GREB1LQ9C091 1923 aaPredicted RBP24.89■■□□□ 1.57
TSPAN3-202ENST00000346495 IGKV6D-41A0A0C4DH26 115 aa24.88■■□□□ 1.57
TSPAN3-202ENST00000346495 EIF6P56537 245 aaKnown RBP24.88■■□□□ 1.57
TSPAN3-202ENST00000346495 PPP4R3BQ5MIZ7 849 aa24.88■■□□□ 1.57
TSPAN3-202ENST00000346495 ELP1O95163 1332 aa24.88■■□□□ 1.57
TSPAN3-202ENST00000346495 FZD9O00144 591 aa24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 GUCY1A2P33402 732 aa24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 UBE2HP62256 183 aa24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 KIF23Q02241 960 aaPredicted RBP24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 FKBP1CQ5VVH2 108 aa24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 METTL16Q86W50 562 aaKnown RBP24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 SRBD1Q8N5C6 995 aaKnown RBP24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 MTMR4Q9NYA4 1195 aa24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 TFIP11Q9UBB9 837 aaKnown RBP24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 CNTNAP5Q8WYK1 1306 aa24.87■■□□□ 1.57
TSPAN3-202ENST00000346495 MYO1BO43795 1136 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 FAM151AQ8WW52 585 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 ZBED3Q96IU2 234 aaPredicted RBP24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 GZF1Q9H116 711 aaPredicted RBP24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 DNAJC18Q9H819 358 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 RBM27Q9P2N5 1060 aaKnown RBP24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 CLRN2A0PK11 232 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 TCP10L2B9ZVM9 353 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 UBE2Q2LH0YL09 131 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 GADD45BO75293 160 aaPredicted RBP24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 XBP1P17861 261 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 SPATA32Q96LK8 384 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 MYOZ2Q9NPC6 264 aa24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 V9GY48 417 aaPredicted RBP24.86■■□□□ 1.57
TSPAN3-202ENST00000346495 PRELPP51888 382 aa24.85■■□□□ 1.57
TSPAN3-202ENST00000346495 ZNF280AP59817 542 aaPredicted RBP24.85■■□□□ 1.57
TSPAN3-202ENST00000346495 TATDN1Q6P1N9 297 aa24.85■■□□□ 1.57
TSPAN3-202ENST00000346495 LZTS2Q9BRK4 669 aa24.85■■□□□ 1.57
TSPAN3-202ENST00000346495 FHDC1Q9C0D6 1143 aaPredicted RBP24.85■■□□□ 1.57
TSPAN3-202ENST00000346495 MAD2L2Q9UI95 211 aa24.85■■□□□ 1.57
TSPAN3-202ENST00000346495 TTLL1O95922 423 aa24.84■■□□□ 1.57
TSPAN3-202ENST00000346495 SAFBQ15424 915 aaKnown RBP eCLIP24.84■■□□□ 1.57
TSPAN3-202ENST00000346495 PKN1Q16512 942 aa24.84■■□□□ 1.57
TSPAN3-202ENST00000346495 CERKLQ49MI3 558 aaPredicted RBP24.84■■□□□ 1.57
TSPAN3-202ENST00000346495 LEO1Q8WVC0 666 aaPredicted RBP24.84■■□□□ 1.57
TSPAN3-202ENST00000346495 DICER1Q9UPY3 1922 aaKnown RBP24.84■■□□□ 1.57
TSPAN3-202ENST00000346495 PALM3A6NDB9 673 aaPredicted RBP24.83■■□□□ 1.57
TSPAN3-202ENST00000346495 MPHOSPH10O00566 681 aaKnown RBP24.83■■□□□ 1.57
TSPAN3-202ENST00000346495 MMP1P03956 469 aa24.83■■□□□ 1.57
TSPAN3-202ENST00000346495 GNL2Q13823 731 aaKnown RBP24.83■■□□□ 1.57
TSPAN3-202ENST00000346495 DPF2Q92785 391 aa24.83■■□□□ 1.57
TSPAN3-202ENST00000346495 CSRNP1Q96S65 589 aa24.83■■□□□ 1.57
TSPAN3-202ENST00000346495 KIF28PB7ZC32 967 aa24.83■■□□□ 1.56
TSPAN3-202ENST00000346495 FAM83AQ86UY5 434 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms