RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 HIP1O00291 1037 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 SEC24BO95487 1268 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 GABPAQ06546 454 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 PNMA3Q9UL41 463 aa16.44■□□□□ 0.22
TPM4-202ENST00000344824 GNAT2P19087 354 aa16.43■□□□□ 0.22
TPM4-202ENST00000344824 BACE1P56817 501 aa16.43■□□□□ 0.22
TPM4-202ENST00000344824 IRX3P78415 501 aaPredicted RBP16.43■□□□□ 0.22
TPM4-202ENST00000344824 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.222e-8■■□□□ 13.7
TPM4-202ENST00000344824 SEPT2Q15019 361 aa16.43■□□□□ 0.22
TPM4-202ENST00000344824 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
TPM4-202ENST00000344824 C12orf60Q5U649 245 aa16.43■□□□□ 0.22
TPM4-202ENST00000344824 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
TPM4-202ENST00000344824 FBXO46Q6PJ61 603 aaPredicted RBP16.43■□□□□ 0.22
TPM4-202ENST00000344824 ESYT1Q9BSJ8 1104 aa16.43■□□□□ 0.22
TPM4-202ENST00000344824 EPB41L4AQ9HCS5 686 aaPredicted RBP16.43■□□□□ 0.22
TPM4-202ENST00000344824 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 A0A0D9SFI3 127 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 GSG1L2A8MUP6 293 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 OSBPP22059 807 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 CDK8P49336 464 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 LACTBP83111 547 aaPredicted RBP16.42■□□□□ 0.22
TPM4-202ENST00000344824 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
TPM4-202ENST00000344824 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 HPS5Q9UPZ3 1129 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 DOCK3Q8IZD9 2030 aa16.42■□□□□ 0.22
TPM4-202ENST00000344824 GREB1LQ9C091 1923 aaPredicted RBP16.41■□□□□ 0.22
TPM4-202ENST00000344824 AKR1B1P15121 316 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 CAP1Q01518 475 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 C17orf99Q6UX52 265 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 C16orf86Q6ZW13 317 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 RUFY2Q8WXA3 655 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 NAPBQ9H115 298 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 IL25Q9H293 177 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
TPM4-202ENST00000344824 C19orf81C9J6K1 198 aa16.4■□□□□ 0.22
TPM4-202ENST00000344824 FMNL1O95466 1100 aaPredicted RBP16.4■□□□□ 0.22
TPM4-202ENST00000344824 ATP2B2Q01814 1243 aa16.4■□□□□ 0.22
TPM4-202ENST00000344824 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
TPM4-202ENST00000344824 ANKRD13CQ8N6S4 541 aa16.4■□□□□ 0.22
TPM4-202ENST00000344824 ACER1Q8TDN7 264 aa16.4■□□□□ 0.22
TPM4-202ENST00000344824 ASCC2Q9H1I8 757 aaPredicted RBP16.4■□□□□ 0.22
TPM4-202ENST00000344824 BCRP11274 1271 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 PSMC4P43686 418 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 USP14P54578 494 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 ICA1Q05084 483 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 IFNL3Q8IZI9 196 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
TPM4-202ENST00000344824 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
TPM4-202ENST00000344824 SGSM2O43147 1006 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 RAD21O60216 631 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 SOX10P56693 466 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 ANO2Q9NQ90 1003 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 PTPN22Q9Y2R2 807 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 HTTP42858 3142 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
TPM4-202ENST00000344824 PRDM1O75626 825 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 MCMDC2Q4G0Z9 681 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
TPM4-202ENST00000344824 CCDC17Q96LX7 622 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 PAGR1Q9BTK6 254 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 HELLSQ9NRZ9 838 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 PTCH2Q9Y6C5 1203 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 LAMA4Q16363 1823 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 RAD50Q92878 1312 aa16.37■□□□□ 0.21
TPM4-202ENST00000344824 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
TPM4-202ENST00000344824 VCAM1P19320 739 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 CTGFP29279 349 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 FCGRTP55899 365 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
TPM4-202ENST00000344824 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 KIAA1683Q9H0B3 1180 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 UPF2Q9HAU5 1272 aaKnown RBP16.36■□□□□ 0.21
TPM4-202ENST00000344824 MYPNQ86TC9 1320 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 TNPO2O14787 897 aaKnown RBP16.36■□□□□ 0.21
TPM4-202ENST00000344824 REC8O95072 547 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 PPARAQ07869 468 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 FAM110CQ1W6H9 321 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 KIAA1211Q6ZU35 1233 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 TANGO6Q9C0B7 1094 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 SH2D4AQ9H788 454 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
TPM4-202ENST00000344824 CENPFP49454 3210 aa16.35■□□□□ 0.21
TPM4-202ENST00000344824 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms