RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TGFB2P61812 414 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 MYSM1Q5VVJ2 828 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 PNMA1Q8ND90 353 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 ANKS1AQ92625 1134 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 CEP95Q96GE4 821 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 RCOR1Q9UKL0 485 aa15.76■□□□□ 0.11
CDC42-202ENST00000344548 BTBD18B2RXH4 712 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 AKR1B1P15121 316 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 NEDD1Q8NHV4 660 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 OXER1Q8TDS5 423 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 MRIQ9BWK5 157 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 DNAJC18Q9H819 358 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 KAT14Q9H8E8 782 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 ADAMTS3O15072 1205 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 POLD1P28340 1107 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 PTGER2P43116 358 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 CFAP100Q494V2 611 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 TRIM22Q8IYM9 498 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 CPVLQ9H3G5 476 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 CNTNAP5Q8WYK1 1306 aa15.75■□□□□ 0.11
CDC42-202ENST00000344548 DEXIO95424 95 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 SHMT1P34896 483 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 NR5A1Q13285 461 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 GMLQ99445 158 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 RNF26Q9BY78 433 aaPredicted RBP15.74■□□□□ 0.11
CDC42-202ENST00000344548 SERPINA10Q9UK55 444 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 CFAP45Q9UL16 551 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 GOLGA8HP0CJ92 632 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 HDLBPQ00341 1268 aaKnown RBP15.74■□□□□ 0.11
CDC42-202ENST00000344548 MAD2L2Q9UI95 211 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 SERPINB13Q9UIV8 391 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 SIPA1L1O43166 1804 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 BRCA1P38398 1863 aaKnown RBP15.74■□□□□ 0.11
CDC42-202ENST00000344548 MYH6P13533 1939 aa15.74■□□□□ 0.11
CDC42-202ENST00000344548 NFKBIEO00221 500 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 MMP1P03956 469 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 VIL1P09327 827 aaKnown RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 CALM1P0DP23 149 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 CALM2P0DP24 149 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 CALM3P0DP25 149 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.111e-6■■■□□ 14.8
CDC42-202ENST00000344548 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 PPP2R5BQ15173 497 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 CSPP1Q1MSJ5 1256 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 RSBN1LQ6PCB5 846 aaPredicted RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 CTCFLQ8NI51 663 aaPredicted RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 GRPEL1Q9HAV7 217 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 RBM28Q9NW13 759 aaKnown RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 SHTN1A0MZ66 631 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 PRPF3O43395 683 aaKnown RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 CYTH3O43739 400 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 PRELPP51888 382 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 NOM1Q5C9Z4 860 aaKnown RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 DALRD3Q5D0E6 543 aaKnown RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 DIS3L2Q8IYB7 885 aaKnown RBP15.73■□□□□ 0.11
CDC42-202ENST00000344548 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
CDC42-202ENST00000344548 PSME4Q14997 1843 aa15.72■□□□□ 0.11
CDC42-202ENST00000344548 FAM205CA6NFA0 338 aa15.72■□□□□ 0.11
CDC42-202ENST00000344548 NR1I2O75469 434 aa15.72■□□□□ 0.11
CDC42-202ENST00000344548 EARS2Q5JPH6 523 aaKnown RBP15.72■□□□□ 0.11
CDC42-202ENST00000344548 IDI2Q9BXS1 227 aa15.72■□□□□ 0.11
CDC42-202ENST00000344548 RBSNQ9H1K0 784 aa15.72■□□□□ 0.11
CDC42-202ENST00000344548 GOLPH3LQ9H4A5 285 aa15.72■□□□□ 0.11
CDC42-202ENST00000344548 RTEL1Q9NZ71 1219 aa15.72■□□□□ 0.11
CDC42-202ENST00000344548 NOVP48745 357 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 CXCL9Q07325 125 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 NPY5RQ15761 445 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 BRAPQ7Z569 592 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 NLGN2Q8NFZ4 835 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 ZNF396Q96N95 335 aaPredicted RBP15.71■□□□□ 0.11
CDC42-202ENST00000344548 ZNF287Q9HBT7 754 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 DACT1Q9NYF0 836 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 TOB1P50616 345 aaPredicted RBP15.71■□□□□ 0.11
CDC42-202ENST00000344548 TRIM29Q14134 588 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 GRM4Q14833 912 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 GRIPAP1Q4V328 841 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 USP17L2Q6R6M4 530 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 LRSAM1Q6UWE0 723 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 ZNRF3Q9ULT6 936 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 PCDHA7Q9UN72 937 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 BCS1LQ9Y276 419 aa15.71■□□□□ 0.11
CDC42-202ENST00000344548 IGKV6D-41A0A0C4DH26 115 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 CLRN2A0PK11 232 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 CAMK4Q16566 473 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 CCDC183Q5T5S1 534 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 WASF1Q92558 559 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 MTMR4Q9NYA4 1195 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 NASPP49321 788 aaPredicted RBP15.7■□□□□ 0.1
CDC42-202ENST00000344548 SF3A1Q15459 793 aaKnown RBP15.7■□□□□ 0.1
CDC42-202ENST00000344548 TYW1BQ6NUM6 668 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 CDAN1Q8IWY9 1227 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 LRRC47Q8N1G4 583 aaKnown RBP15.7■□□□□ 0.1
CDC42-202ENST00000344548 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 PHF20Q9BVI0 1012 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 FER1L6Q2WGJ9 1857 aa15.7■□□□□ 0.1
CDC42-202ENST00000344548 PALM3A6NDB9 673 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms