RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 C12orf42Q96LP6 360 aa19.26■□□□□ 0.67
ATG4B-201ENST00000344376 CCDC17Q96LX7 622 aa19.26■□□□□ 0.67
ATG4B-201ENST00000344376 EMILIN3Q9NT22 766 aa19.26■□□□□ 0.67
ATG4B-201ENST00000344376 CYP2D7A0A087X1C5 515 aa19.25■□□□□ 0.67
ATG4B-201ENST00000344376 TNPO2O14787 897 aaKnown RBP19.25■□□□□ 0.67
ATG4B-201ENST00000344376 C16orf86Q6ZW13 317 aa19.25■□□□□ 0.67
ATG4B-201ENST00000344376 GTF3C2Q8WUA4 911 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-201ENST00000344376 LNPKQ9C0E8 428 aa19.25■□□□□ 0.67
ATG4B-201ENST00000344376 M0R2C6 588 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 APPP05067 770 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 TDO2P48775 406 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 CDK8P49336 464 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 B4GALNT3Q6L9W6 998 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 ACER1Q8TDN7 264 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 EVI5LQ96CN4 794 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 ZSWIM8A7E2V4 1837 aa19.24■□□□□ 0.67
ATG4B-201ENST00000344376 GSG1L2A8MUP6 293 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 GUCY1A2P33402 732 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 HERVK_113P62684 666 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 PRKCZQ05513 592 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 SBK1Q52WX2 424 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 COA7Q96BR5 231 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 ZNF333Q96JL9 665 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 P2RX7Q99572 595 aaKnown RBP19.23■□□□□ 0.67
ATG4B-201ENST00000344376 TMEM106CQ9BVX2 250 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 SH2D4AQ9H788 454 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 AKR1B1P15121 316 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 ZMYM1Q5SVZ6 1142 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 CHD1LQ86WJ1 897 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 ARHGEF10LQ9HCE6 1279 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 MORF4L1Q9UBU8 362 aa19.23■□□□□ 0.67
ATG4B-201ENST00000344376 MINDY4BA8MYZ0 360 aa19.22■□□□□ 0.67
ATG4B-201ENST00000344376 IGHDP01880 384 aa19.22■□□□□ 0.67
ATG4B-201ENST00000344376 VCAM1P19320 739 aa19.22■□□□□ 0.67
ATG4B-201ENST00000344376 ICA1Q05084 483 aa19.22■□□□□ 0.67
ATG4B-201ENST00000344376 SH3TC2Q8TF17 1288 aa19.22■□□□□ 0.67
ATG4B-201ENST00000344376 BAZ2AQ9UIF9 1905 aaKnown RBP19.22■□□□□ 0.67
ATG4B-201ENST00000344376 HTTP42858 3142 aa19.22■□□□□ 0.67
ATG4B-201ENST00000344376 PATL2C9JE40 543 aaKnown RBP19.21■□□□□ 0.67
ATG4B-201ENST00000344376 GRK4P32298 578 aa19.21■□□□□ 0.67
ATG4B-201ENST00000344376 NUCB1Q02818 461 aa19.21■□□□□ 0.67
ATG4B-201ENST00000344376 GPRC5AQ8NFJ5 357 aa19.21■□□□□ 0.67
ATG4B-201ENST00000344376 ZNF287Q9HBT7 754 aa19.21■□□□□ 0.67
ATG4B-201ENST00000344376 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
ATG4B-201ENST00000344376 SLAIN1Q8ND83 568 aa19.2■□□□□ 0.66
ATG4B-201ENST00000344376 SEC62Q99442 399 aaKnown RBP19.2■□□□□ 0.66
ATG4B-201ENST00000344376 MKNK2Q9HBH9 465 aa19.2■□□□□ 0.66
ATG4B-201ENST00000344376 EPB41L4AQ9HCS5 686 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-201ENST00000344376 ROBO3Q96MS0 1386 aa19.2■□□□□ 0.66
ATG4B-201ENST00000344376 SMIM22K7EJ46 135 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 FLT3LGP49771 235 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 CATSPERGQ6ZRH7 1159 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 CCAR1Q8IX12 1150 aaKnown RBP19.19■□□□□ 0.66
ATG4B-201ENST00000344376 IFNL3Q8IZI9 196 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 PAGR1Q9BTK6 254 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 RPAP3Q9H6T3 665 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-201ENST00000344376 KANSL2Q9H9L4 492 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 BIN2Q9UBW5 565 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-201ENST00000344376 GABRQQ9UN88 632 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 TRIM6-TRIM34B2RNG4 842 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 SLC3A2P08195 630 aaKnown RBP19.19■□□□□ 0.66
ATG4B-201ENST00000344376 UBXN2AP68543 259 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 LPAR1Q92633 364 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 NAPBQ9H115 298 aa19.19■□□□□ 0.66
ATG4B-201ENST00000344376 A0A1W2PRG0 241 aa19.18■□□□□ 0.66
ATG4B-201ENST00000344376 MYCP01106 439 aaPredicted RBP19.18■□□□□ 0.66
ATG4B-201ENST00000344376 ATP2B2Q01814 1243 aa19.18■□□□□ 0.66
ATG4B-201ENST00000344376 IRF5Q13568 498 aa19.18■□□□□ 0.66
ATG4B-201ENST00000344376 TMX2Q9Y320 296 aa19.18■□□□□ 0.66
ATG4B-201ENST00000344376 MYH8P13535 1937 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 MGAMO43451 1857 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 POTEFA5A3E0 1075 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 ADCY3O60266 1144 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 MAPK4P31152 587 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 ERVK-24P63145 666 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
ATG4B-201ENST00000344376 CLEC10AQ8IUN9 316 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 STK11IPQ8N1F8 1099 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 TANGO6Q9C0B7 1094 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 CWC22Q9HCG8 908 aaKnown RBP19.17■□□□□ 0.66
ATG4B-201ENST00000344376 TXNRD2Q9NNW7 524 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 HELLSQ9NRZ9 838 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 RBPJLQ9UBG7 517 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 RABGAP1Q9Y3P9 1069 aa19.17■□□□□ 0.66
ATG4B-201ENST00000344376 CCNA1P78396 465 aa19.16■□□□□ 0.66
ATG4B-201ENST00000344376 PXYLP1Q8TE99 480 aa19.16■□□□□ 0.66
ATG4B-201ENST00000344376 RILPL2Q969X0 211 aa19.16■□□□□ 0.66
ATG4B-201ENST00000344376 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
ATG4B-201ENST00000344376 EEF2P13639 858 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms