RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CXXC1Q9P0U4 656 aaPredicted RBP8.78□□□□□ -1
ZNF540-202ENST00000343599 ZNF219Q9P2Y4 722 aaPredicted RBP8.78□□□□□ -1
ZNF540-202ENST00000343599 R3HCC1Q9Y3T6 440 aaKnown RBP8.78□□□□□ -1
ZNF540-202ENST00000343599 NCK2O43639 380 aa8.77□□□□□ -1
ZNF540-202ENST00000343599 IRX5P78411 483 aaPredicted RBP8.77□□□□□ -1
ZNF540-202ENST00000343599 LCTP09848 1927 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 STK25O00506 426 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 ADCY3O60266 1144 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 DOK7Q18PE1 504 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 NBPF12Q5TAG4 269 aaPredicted RBP8.77□□□□□ -1.01
ZNF540-202ENST00000343599 SMC4Q9NTJ3 1288 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 GBF1Q92538 1859 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 PI4KAP2A4QPH2 592 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 DCDC2CA8MYV0 355 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 CLGNO14967 610 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 KCNJ4P48050 445 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 PSEN1P49768 467 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
ZNF540-202ENST00000343599 PI4KAP1Q8N8J0 262 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 RAET1EQ8TD07 263 aa8.77□□□□□ -1.01
ZNF540-202ENST00000343599 CAP2P40123 477 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 GTF2IP78347 998 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 MFSD14BQ5SR56 506 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 ZNF280CQ8ND82 737 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 CCDC17Q96LX7 622 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 PICK1Q9NRD5 415 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 KCNG1Q9UIX4 513 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 DAGLAQ9Y4D2 1042 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 RBM47A0AV96 593 aaKnown RBP8.76□□□□□ -1.01
ZNF540-202ENST00000343599 HOXD11P31277 338 aaPredicted RBP8.76□□□□□ -1.01
ZNF540-202ENST00000343599 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 DCTN1Q14203 1278 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 MFSD14CQ5VZR4 134 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 LHX8Q68G74 356 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 RCAN3Q9UKA8 241 aa8.76□□□□□ -1.01
ZNF540-202ENST00000343599 TTF2Q9UNY4 1162 aaKnown RBP8.76□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 BAIAP3O94812 1187 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 GNAI3P08754 354 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 CYBAP13498 195 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 MSNP26038 577 aaKnown RBP8.75□□□□□ -1.01
ZNF540-202ENST00000343599 PSMC4P43686 418 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 SASS6Q6UVJ0 657 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 C8orf58Q8NAV2 365 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 HERVK_113Q902F9 699 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 NUDT12Q9BQG2 462 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 RHOBTB2Q9BYZ6 727 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 YY1AP1Q9H869 796 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 PI4KBQ9UBF8 816 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 PRKAG3Q9UGI9 489 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 SHTN1A0MZ66 631 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 INHAP05111 366 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 CSPP1Q1MSJ5 1256 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 CENPQQ7L2Z9 268 aaPredicted RBP8.75□□□□□ -1.01
ZNF540-202ENST00000343599 SKAP1Q86WV1 359 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 LMAN2LQ9H0V9 348 aa8.75□□□□□ -1.01
ZNF540-202ENST00000343599 MAP3K20Q9NYL2 800 aaKnown RBP8.75□□□□□ -1.01
ZNF540-202ENST00000343599 PCP11498 1178 aaKnown RBP8.74□□□□□ -1.01
ZNF540-202ENST00000343599 PTPREP23469 700 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 RHBDL3P58872 404 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 TJAP1Q5JTD0 557 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 CDC42EP5Q6NZY7 148 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 PSRC1Q6PGN9 363 aaPredicted RBP8.74□□□□□ -1.01
ZNF540-202ENST00000343599 NKRFO15226 690 aaKnown RBP eCLIP8.74□□□□□ -1.01
ZNF540-202ENST00000343599 CCDC96Q2M329 555 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 AXDND1Q5T1B0 1012 aaPredicted RBP8.74□□□□□ -1.01
ZNF540-202ENST00000343599 BMP8AQ7Z5Y6 402 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 KLHDC9Q8NEP7 349 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 GPRC5AQ8NFJ5 357 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 KAZALD1Q96I82 304 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 PRDM16Q9HAZ2 1276 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 EVI5O60447 810 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 GPR37L1O60883 481 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 ATG9AQ7Z3C6 839 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 CNPY4Q8N129 248 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 ZNF710Q8N1W2 664 aa8.74□□□□□ -1.01
ZNF540-202ENST00000343599 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
ZNF540-202ENST00000343599 DDX20Q9UHI6 824 aaKnown RBP8.74□□□□□ -1.01
ZNF540-202ENST00000343599 BAG3O95817 575 aa8.73□□□□□ -1.01
ZNF540-202ENST00000343599 EN2P19622 333 aaPredicted RBP8.73□□□□□ -1.01
ZNF540-202ENST00000343599 BACE1P56817 501 aa8.73□□□□□ -1.01
ZNF540-202ENST00000343599 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.01
ZNF540-202ENST00000343599 PLEKHH3Q7Z736 793 aa8.73□□□□□ -1.01
ZNF540-202ENST00000343599 ERC1Q8IUD2 1116 aa8.73□□□□□ -1.01
ZNF540-202ENST00000343599 MTIF3Q9H2K0 278 aaKnown RBP8.73□□□□□ -1.01
ZNF540-202ENST00000343599 CGNQ9P2M7 1197 aaKnown RBP8.73□□□□□ -1.01
ZNF540-202ENST00000343599 NOL7Q9UMY1 257 aaKnown RBP8.73□□□□□ -1.01
ZNF540-202ENST00000343599 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.73□□□□□ -1.01
ZNF540-202ENST00000343599 ZMYM2Q9UBW7 1377 aa8.73□□□□□ -1.01
ZNF540-202ENST00000343599 MYH4Q9Y623 1939 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms