RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 BLZF1Q9H2G9 400 aa27.38■■□□□ 1.97
NELFB-201ENST00000343053 DACH1Q9UI36 760 aa27.38■■□□□ 1.97
NELFB-201ENST00000343053 BMS1Q14692 1282 aaKnown RBP27.38■■□□□ 1.97
NELFB-201ENST00000343053 SEC23AQ15436 765 aa27.38■■□□□ 1.97
NELFB-201ENST00000343053 RNF41Q9H4P4 317 aaPredicted RBP27.38■■□□□ 1.97
NELFB-201ENST00000343053 CCDC152Q4G0S7 254 aa27.37■■□□□ 1.97
NELFB-201ENST00000343053 TMCO3Q6UWJ1 677 aa27.37■■□□□ 1.97
NELFB-201ENST00000343053 ESR2Q92731 530 aa27.37■■□□□ 1.97
NELFB-201ENST00000343053 CEP131Q9UPN4 1083 aa27.37■■□□□ 1.97
NELFB-201ENST00000343053 SYNRGQ9UMZ2 1314 aa27.37■■□□□ 1.97
NELFB-201ENST00000343053 EXOC5O00471 708 aa27.37■■□□□ 1.97
NELFB-201ENST00000343053 CRKLP46109 303 aaKnown RBP27.37■■□□□ 1.97
NELFB-201ENST00000343053 BCORQ6W2J9 1755 aa27.37■■□□□ 1.97
NELFB-201ENST00000343053 STX10O60499 249 aa27.36■■□□□ 1.97
NELFB-201ENST00000343053 ATP6V1AP38606 617 aa27.36■■□□□ 1.97
NELFB-201ENST00000343053 IFIT1BQ5T764 474 aaKnown RBP27.36■■□□□ 1.97
NELFB-201ENST00000343053 CCDC12Q8WUD4 166 aaPredicted RBP27.36■■□□□ 1.97
NELFB-201ENST00000343053 ADAMTS3O15072 1205 aa27.36■■□□□ 1.97
NELFB-201ENST00000343053 POLR3GO15318 223 aaPredicted RBP27.36■■□□□ 1.97
NELFB-201ENST00000343053 KRT2P35908 639 aa27.36■■□□□ 1.97
NELFB-201ENST00000343053 CCT6AP40227 531 aaKnown RBP27.36■■□□□ 1.97
NELFB-201ENST00000343053 PPP2R3AQ06190 1150 aa27.36■■□□□ 1.97
NELFB-201ENST00000343053 RBL2Q08999 1139 aa27.36■■□□□ 1.97
NELFB-201ENST00000343053 INTS5Q6P9B9 1019 aaKnown RBP27.36■■□□□ 1.97
NELFB-201ENST00000343053 NID2Q14112 1375 aa27.36■■□□□ 1.97
NELFB-201ENST00000343053 PLA2G4AP47712 749 aa27.35■■□□□ 1.97
NELFB-201ENST00000343053 EIF5P55010 431 aaKnown RBP27.35■■□□□ 1.97
NELFB-201ENST00000343053 NR1I3Q14994 352 aa27.35■■□□□ 1.97
NELFB-201ENST00000343053 PAGE5Q96GU1 130 aa27.35■■□□□ 1.97
NELFB-201ENST00000343053 DPYDQ12882 1025 aa27.35■■□□□ 1.97
NELFB-201ENST00000343053 FCHSD1Q86WN1 690 aa27.35■■□□□ 1.97
NELFB-201ENST00000343053 JAG2Q9Y219 1238 aa27.35■■□□□ 1.97
NELFB-201ENST00000343053 C3orf67Q6ZVT6 689 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 SMIM5Q71RC9 77 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 IGSF22Q8N9C0 903 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 ZNF579Q8NAF0 562 aaKnown RBP27.34■■□□□ 1.97
NELFB-201ENST00000343053 CCDC34Q96HJ3 373 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 ZSCAN10Q96SZ4 725 aaPredicted RBP27.34■■□□□ 1.97
NELFB-201ENST00000343053 TFRCP02786 760 aaKnown RBP27.34■■□□□ 1.97
NELFB-201ENST00000343053 VEGFAP15692 232 aaPredicted RBP27.34■■□□□ 1.97
NELFB-201ENST00000343053 RAD9BQ6WBX8 426 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 TMTC2Q8N394 836 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 RNF26Q9BY78 433 aaPredicted RBP27.34■■□□□ 1.97
NELFB-201ENST00000343053 CTNND2Q9UQB3 1225 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 NHSL1Q5SYE7 1610 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 COL1A1P02452 1464 aaPredicted RBP27.34■■□□□ 1.97
NELFB-201ENST00000343053 TUBB4AP04350 444 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 KIFC2Q96AC6 838 aa27.34■■□□□ 1.97
NELFB-201ENST00000343053 ARGLU1Q9NWB6 273 aaPredicted RBP27.34■■□□□ 1.97
NELFB-201ENST00000343053 CICQ96RK0 1608 aaPredicted RBP27.33■■□□□ 1.97
NELFB-201ENST00000343053 EFCAB8A8MWE9 144 aa27.33■■□□□ 1.97
NELFB-201ENST00000343053 AKR1B15C9JRZ8 316 aaPredicted RBP27.33■■□□□ 1.97
NELFB-201ENST00000343053 MYO1BO43795 1136 aa27.33■■□□□ 1.97
NELFB-201ENST00000343053 CCDC87Q9NVE4 849 aa27.33■■□□□ 1.97
NELFB-201ENST00000343053 A0A1B0GTH6 734 aa27.33■■□□□ 1.96
NELFB-201ENST00000343053 FAM47AQ5JRC9 791 aa27.33■■□□□ 1.96
NELFB-201ENST00000343053 APTXQ7Z2E3 356 aaKnown RBP27.33■■□□□ 1.96
NELFB-201ENST00000343053 NOL10Q9BSC4 688 aaKnown RBP27.33■■□□□ 1.96
NELFB-201ENST00000343053 PHF20Q9BVI0 1012 aa27.33■■□□□ 1.96
NELFB-201ENST00000343053 MAPK8IP1Q9UQF2 711 aa27.33■■□□□ 1.96
NELFB-201ENST00000343053 CDC25AP30304 524 aa27.32■■□□□ 1.96
NELFB-201ENST00000343053 MRFAP1Q9Y605 127 aa27.32■■□□□ 1.96
NELFB-201ENST00000343053 CATIPQ7Z7H3 387 aa27.32■■□□□ 1.96
NELFB-201ENST00000343053 TRIML1Q8N9V2 468 aa27.32■■□□□ 1.96
NELFB-201ENST00000343053 AATFQ9NY61 560 aaKnown RBP eCLIP27.32■■□□□ 1.963e-6■■■□□ 15.6
NELFB-201ENST00000343053 RTL9Q8NET4 1388 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 CAMTA2O94983 1202 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 ZRANB2O95218 330 aaKnown RBP eCLIP27.31■■□□□ 1.965e-8■■■■□ 22.5
NELFB-201ENST00000343053 NTSR2O95665 410 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 XBP1P17861 261 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 PTGDRQ13258 359 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 KANK3Q6NY19 840 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 SPATA20Q8TB22 786 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 MYH8P13535 1937 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 SASH3O75995 380 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 MAP3K9P80192 1104 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 FUT2Q10981 343 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 BICDL1Q6ZP65 573 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 PPFIBP1Q86W92 1011 aa27.31■■□□□ 1.96
NELFB-201ENST00000343053 RIOK1Q9BRS2 568 aaKnown RBP27.31■■□□□ 1.96
NELFB-201ENST00000343053 PUF60Q9UHX1 559 aaKnown RBP27.31■■□□□ 1.96
NELFB-201ENST00000343053 CASP14P31944 242 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 KCNQ4P56696 695 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 ZNF384Q8TF68 577 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 SRRTQ9BXP5 876 aaKnown RBP27.3■■□□□ 1.96
NELFB-201ENST00000343053 KLRK1P26718 216 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 MCM7P33993 719 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 ITPK1Q13572 414 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 CUL4BQ13620 913 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 PIK3AP1Q6ZUJ8 805 aa27.3■■□□□ 1.96
NELFB-201ENST00000343053 ELOA2Q8IYF1 753 aaPredicted RBP27.3■■□□□ 1.96
NELFB-201ENST00000343053 PLCH1Q4KWH8 1693 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 USP17L12C9JPN9 530 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 USP17L21D6R901 530 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 ABL1P00519 1130 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 TTC38Q5R3I4 469 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 SPATA1Q5VX52 437 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 ZCCHC17Q9NP64 241 aaKnown RBP27.29■■□□□ 1.96
NELFB-201ENST00000343053 CCDC175P0C221 793 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 ERCC5P28715 1186 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms