RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 DEPTORQ8TB45 409 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 NELFBQ8WX92 580 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 GLG1Q92896 1179 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.88■□□□□ 0.29
COL11A2-201ENST00000341947 GCKRQ14397 625 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 GNPTABQ3T906 1256 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 KLHL30Q0D2K2 578 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 MIER3Q7Z3K6 550 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 CHURC1Q8WUH1 139 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 ATP10BO94823 1461 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 APBA3O96018 575 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 PPP2R5CQ13362 524 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 SFMBT2Q5VUG0 894 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 MAIP1Q8WWC4 291 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 TRIM31Q9BZY9 425 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 KDM3AQ9Y4C1 1321 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 CEP104O60308 925 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 TNNI1P19237 187 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 TFAP4Q01664 338 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 SDCCAG8Q86SQ7 713 aaPredicted RBP16.88■□□□□ 0.29
COL11A2-201ENST00000341947 CCDC94Q9BW85 323 aaPredicted RBP16.88■□□□□ 0.29
COL11A2-201ENST00000341947 TAB2Q9NYJ8 693 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 HHATQ5VTY9 493 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 REXO1Q8N1G1 1221 aaKnown RBP16.87■□□□□ 0.29
COL11A2-201ENST00000341947 CCDC24Q8N4L8 307 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 UIMC1Q96RL1 719 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 TTLL3Q9Y4R7 772 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 RAD51AP2Q09MP3 1159 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 POSTNQ15063 836 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 MAP7Q14244 749 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 CCDC89Q8N998 374 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 TSKSQ9UJT2 592 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 GAS7O60861 476 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 ZAP70P43403 619 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 ARHGEF16Q5VV41 709 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 PHKBQ93100 1093 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 I3L4J1 428 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 KIF22Q14807 665 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 KRT40Q6A162 431 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 MED10Q9BTT4 135 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 MLXIPQ9HAP2 919 aa16.87■□□□□ 0.29
COL11A2-201ENST00000341947 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 EDC4Q6P2E9 1401 aaKnown RBP16.86■□□□□ 0.29
COL11A2-201ENST00000341947 TEKT1Q969V4 418 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 MYO1AQ9UBC5 1043 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 BAG6P46379 1132 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 IWS1Q96ST2 819 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 USP21Q9UK80 565 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 NR1I2O75469 434 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 GNA14O95837 355 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 MAGEA1P43355 309 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 UHRF1BP1Q6BDS2 1440 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 ZNF202O95125 648 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 SLC12A2P55011 1212 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 TTC31Q49AM3 519 aaPredicted RBP16.86■□□□□ 0.29
COL11A2-201ENST00000341947 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 ERO1AQ96HE7 468 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
COL11A2-201ENST00000341947 SATB1Q01826 763 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
COL11A2-201ENST00000341947 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
COL11A2-201ENST00000341947 PPARAQ07869 468 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 SEPT6Q14141 434 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 FAM102BQ5T8I3 360 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 DNAJC10Q8IXB1 793 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 CCDC105Q8IYK2 499 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 CACNA2D3Q8IZS8 1091 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 METTL13Q8N6R0 699 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 PAGR1Q9BTK6 254 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 FAM47CQ5HY64 1035 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 FAM47AQ5JRC9 791 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 B4GALNT4Q76KP1 1039 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 RSRC1Q96IZ7 334 aaKnown RBP16.85■□□□□ 0.29
COL11A2-201ENST00000341947 ANO3Q9BYT9 981 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 KCNJ14Q9UNX9 436 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 USP19O94966 1318 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 GOLGA6CA6NDK9 693 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 GOLGA6BA6NDN3 693 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 GOLGA6DP0CG33 693 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 CCDC62Q6P9F0 684 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 GOLGA6AQ9NYA3 693 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 KIF11P52732 1056 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 KLHL7Q8IXQ5 586 aa16.85■□□□□ 0.29
COL11A2-201ENST00000341947 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
COL11A2-201ENST00000341947 RIOK3O14730 519 aaKnown RBP16.84■□□□□ 0.29
COL11A2-201ENST00000341947 ZNF131P52739 623 aa16.84■□□□□ 0.29
COL11A2-201ENST00000341947 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
COL11A2-201ENST00000341947 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
COL11A2-201ENST00000341947 PALM3A6NDB9 673 aaPredicted RBP16.84■□□□□ 0.29
COL11A2-201ENST00000341947 SMCO2A6NFE2 343 aa16.84■□□□□ 0.29
COL11A2-201ENST00000341947 GTF2IP78347 998 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms