RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 ZKSCAN5Q9Y2L8 839 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 DDX60Q8IY21 1712 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 CLCN1P35523 988 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 TRMT44Q8IYL2 757 aaKnown RBP11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 KCNH3Q9ULD8 1083 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 BBOX1O75936 387 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 YEATS4O95619 227 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 SLC39A14Q15043 492 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 SEC23AQ15436 765 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 KRI1Q8N9T8 703 aaKnown RBP11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 POLR3EQ9NVU0 708 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 FAM13BQ9NYF5 915 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 WNK3Q9BYP7 1800 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 STX17P56962 302 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 ARID5BQ14865 1188 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 SHC4Q6S5L8 630 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 FUCA2Q9BTY2 467 aa11.67□□□□□ -0.54
RBFOX1-202ENST00000340209 GOLGA6L6A8MZA4 724 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 PES1O00541 588 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 ADAMTS3O15072 1205 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 C21orf2O43822 256 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 LONRF3Q496Y0 759 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 FMR1NBQ8N0W7 255 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 EPSTI1Q96J88 318 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 SERTAD1Q9UHV2 236 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 CICQ96RK0 1608 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 WNT7AO00755 349 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 KIF5BP33176 963 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 CDK8P49336 464 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
RBFOX1-202ENST00000340209 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 H0YIN7 160 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 CDK11BP21127 795 aaKnown RBP11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 NAPAP54920 295 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 TROAPQ12815 778 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 AOC3Q16853 763 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 NAT10Q9H0A0 1025 aaKnown RBP11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 CSRNP2Q9H175 543 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 NOL7Q9UMY1 257 aaKnown RBP11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 DAGLAQ9Y4D2 1042 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 WDR19Q8NEZ3 1342 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 SERPINC1P01008 464 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 SLC16A2P36021 539 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 PDLIM2Q96JY6 352 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 KIAA1468Q9P260 1216 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 MAPK8IP1Q9UQF2 711 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 FLT1P17948 1338 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 TOB1P50616 345 aaPredicted RBP11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 UVSSAQ2YD98 709 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 JAKMIP3Q5VZ66 844 aa11.65□□□□□ -0.54
RBFOX1-202ENST00000340209 NFIAQ12857 509 aa11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 SF3B2Q13435 895 aaKnown RBP11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 ZNF772Q68DY9 489 aaPredicted RBP11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 SMYD4Q8IYR2 804 aaPredicted RBP11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 CEP95Q96GE4 821 aa11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 TMEM47Q9BQJ4 181 aa11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 RTFDC1Q9BY42 306 aaPredicted RBP11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 BLZF1Q9H2G9 400 aa11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 IL17RBQ9NRM6 502 aa11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.55
RBFOX1-202ENST00000340209 CTAGE5O15320 804 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 MARCH6O60337 910 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 SCG2P13521 617 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 SNAP25P60880 206 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 INF2Q27J81 1249 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 SHROOM1Q2M3G4 852 aaPredicted RBP11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 AXDND1Q5T1B0 1012 aaPredicted RBP11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 CLRN2A0PK11 232 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 KLRF2D3W0D1 207 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 RAD17O75943 681 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 GOLGA8FQ08AF8 430 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 GOLGA8DPQ0D2H9 430 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 IFNKQ9P0W0 207 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 GDF11O95390 407 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 SRGNP10124 158 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 RILPL1Q5EBL4 403 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 RBM26Q5T8P6 1007 aaKnown RBP11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 TMC6Q7Z403 805 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 CERS5Q8N5B7 392 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 ENGASEQ8NFI3 743 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 EEF2KMTQ96G04 330 aa11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 RNF26Q9BY78 433 aaPredicted RBP11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 SEC63Q9UGP8 760 aaKnown RBP11.64□□□□□ -0.55
RBFOX1-202ENST00000340209 PTGDRQ13258 359 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 LETM2Q2VYF4 491 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 CFAP100Q494V2 611 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 C16orf45Q96MC5 204 aaPredicted RBP11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 VEZTQ9HBM0 779 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 RBM28Q9NW13 759 aaKnown RBP11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 USP17L5A8MUK1 530 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms