RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 NMT2O60551 498 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 RBM5P52756 815 aaKnown RBP eCLIP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 CNGA4Q8IV77 575 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 NLRP3Q96P20 1036 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 AGLP35573 1532 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 C6orf229H3BNL8 230 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 IBSPP21815 317 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 ADGRL3Q9HAR2 1447 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 MROH5Q6ZUA9 1318 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 ZMYND10O75800 440 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 PAK1Q13153 545 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 ANKRD7Q92527 254 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 WDR24Q96S15 920 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 VGLL3A8MV65 326 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 TFAP4Q01664 338 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 TBC1D8BQ0IIM8 1120 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 SPTY2D1Q68D10 685 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 WWC2Q6AWC2 1192 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 CTR9Q6PD62 1173 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 ZSCAN10Q96SZ4 725 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 H0YHG0 523 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 IFNAR1P17181 557 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 CEP112Q8N8E3 955 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 GBP3Q9H0R5 595 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 OSBPL5Q9H0X9 879 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 SEPT11Q9NVA2 429 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 RAD51AP2Q09MP3 1159 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 CRACR2BQ8N4Y2 399 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
SEMA4D-201ENST00000339861 SPAG1Q07617 926 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 RESP18Q5W5W9 173 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 DYMQ7RTS9 669 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 SLC35F6Q8N357 371 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 ISCA1Q9BUE6 129 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 FAM107BQ9H098 131 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 ATG3Q9NT62 314 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 BMP15O95972 392 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 INF2Q27J81 1249 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 CCDC40Q4G0X9 1142 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 RMND1Q9NWS8 449 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 PALLDQ8WX93 1383 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 PLCD1P51178 756 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 MRPS25P82663 173 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 PDE4DQ08499 809 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 CSGALNACT2Q8N6G5 542 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 CALML4Q96GE6 196 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 CCDC42Q96M95 316 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 RIPOR2Q9Y4F9 1068 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 PEAK1Q9H792 1746 aa12.49□□□□□ -0.41
SEMA4D-201ENST00000339861 TUBB4AP04350 444 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 TXKP42681 527 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 TCERG1LQ5VWI1 586 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 MAPKAPK5Q8IW41 473 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 TSPYL1Q9H0U9 437 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 TNNI2P48788 182 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 RBM43Q6ZSC3 357 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 CARD10Q9BWT7 1032 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 PARD6BQ9BYG5 372 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 EFCAB8A8MWE9 144 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 STX10O60499 249 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 BMP2KQ9NSY1 1161 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 ZBTB22O15209 634 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 CCNT1O60563 726 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 HIBADHP31937 336 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 MORC3Q14149 939 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 TERF2Q15554 542 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 PTPROQ16827 1216 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 SPATA1Q5VX52 437 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
SEMA4D-201ENST00000339861 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 KCNJ18B7U540 433 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 KCNJ12Q14500 433 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 PDE11AQ9HCR9 933 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 FAM207AQ9NSI2 230 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 CALM1P0DP23 149 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 CALM2P0DP24 149 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 CALM3P0DP25 149 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 CYP2D6P10635 497 aa12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 CYLC1P35663 651 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-201ENST00000339861 BRINP3Q76B58 766 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms