RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 C7orf43Q8WVR3 580 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 PPP1R9BQ96SB3 815 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 MTA3Q9BTC8 594 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 STK32BQ9NY57 414 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 KIAA1551Q9HCM1 1747 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 NID2Q14112 1375 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 TNS1Q9HBL0 1735 aaKnown RBP8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 NRXN2Q9P2S2 1712 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 TCP10Q12799 353 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 SLC39A14Q15043 492 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 NPY5RQ15761 445 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 FMR1NBQ8N0W7 255 aaPredicted RBP8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 TMEM47Q9BQJ4 181 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 USP40Q9NVE5 1235 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 STK36Q9NRP7 1315 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 CYTH3O43739 400 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 PCP11498 1178 aaKnown RBP8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 ANO6Q4KMQ2 910 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 CDC42EP5Q6NZY7 148 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 GPKOWQ92917 476 aaPredicted RBP eCLIP8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 EYA3Q99504 573 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 DNAJC25Q9H1X3 360 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 DDX19AQ9NUU7 478 aaKnown RBP8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 CNTNAP5Q8WYK1 1306 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 SCN9AQ15858 1988 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 YDJCA8MPS7 323 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 ECE2O60344 883 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 LETM1O95202 739 aaPredicted RBP8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 ATL3Q6DD88 541 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 TYW1BQ6NUM6 668 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 SHC4Q6S5L8 630 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 RBM43Q6ZSC3 357 aaKnown RBP8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 CEP95Q96GE4 821 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 PDLIM2Q96JY6 352 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 RNF26Q9BY78 433 aaPredicted RBP8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 KAT14Q9H8E8 782 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 MAD2L2Q9UI95 211 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 LRRC37AA6NMS7 1700 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 ECM29Q5VYK3 1845 aa8.55□□□□□ -1.04
SRFBP1-201ENST00000339397 MYH15Q9Y2K3 1946 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 ADAMTSL1Q8N6G6 1762 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 PRPF3O43395 683 aaKnown RBP8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 YEATS4O95619 227 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 CCDC192P0DO97 292 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 AKAP17AQ02040 695 aaKnown RBP8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 FAM160A1Q05DH4 1040 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 CCDC173Q0VFZ6 552 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 ISM2Q6H9L7 571 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 USP17L2Q6R6M4 530 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 USP49Q70CQ1 688 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 CTCFLQ8NI51 663 aaPredicted RBP8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 MRPS27Q92552 414 aaKnown RBP8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 TMX4Q9H1E5 349 aaPredicted RBP8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 ZNF202O95125 648 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 PFKFB1P16118 471 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 RBM5P52756 815 aaKnown RBP eCLIP8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 CCDC73Q6ZRK6 1079 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 C11orf57Q6ZUT1 292 aaPredicted RBP8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 RASGRP4Q8TDF6 673 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 KCNG4Q8TDN1 519 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 PHF20Q9BVI0 1012 aa8.54□□□□□ -1.04
SRFBP1-201ENST00000339397 CDK5RAP2Q96SN8 1893 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 DDAH1O94760 285 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 ZBTB7AO95365 584 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 AKR1B1P15121 316 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 KCNA3P22001 575 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 CRKP46108 304 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 RCAN1P53805 252 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 DACT2Q5SW24 774 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 STYK1Q6J9G0 422 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 PODNQ7Z5L7 613 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 DGKHQ86XP1 1220 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 ANP32BQ92688 251 aaKnown RBP8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 SDF4Q9BRK5 362 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 CBX8Q9HC52 389 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 SNED1Q8TER0 1413 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 ROBO3Q96MS0 1386 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 BIN1O00499 593 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 FOXN1O15353 648 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 KINO60870 393 aaKnown RBP8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 SAFBQ15424 915 aaKnown RBP eCLIP8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 AMOTL1Q8IY63 956 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 WASF1Q92558 559 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 TRIM44Q96DX7 344 aaPredicted RBP8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 ZNF830Q96NB3 372 aaPredicted RBP8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 FOXP1Q9H334 677 aaPredicted RBP8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 VAT1LQ9HCJ6 419 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 MAST2Q6P0Q8 1798 aa8.53□□□□□ -1.04
SRFBP1-201ENST00000339397 DDTLA6NHG4 134 aaPredicted RBP8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 ADCY5O95622 1261 aa8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 DPEP1P16444 411 aa8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 PLCG2P16885 1265 aa8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 GABPAQ06546 454 aa8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 TEKT1Q969V4 418 aa8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 UBA5Q9GZZ9 404 aa8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 RBM28Q9NW13 759 aaKnown RBP8.52□□□□□ -1.04
SRFBP1-201ENST00000339397 SCAF8Q9UPN6 1271 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms