RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 USP17L22D6RA61 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L17D6RBQ6 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L19D6RCP7 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L20D6RJB6 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 MAPK4P31152 587 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 SHMT1P34896 483 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L24Q0WX57 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 WDR78Q5VTH9 848 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 ACER1Q8TDN7 264 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 GTF3C2Q8WUA4 911 aaPredicted RBP23.5■■□□□ 1.35
ITGA4-202ENST00000339307 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.5■■□□□ 1.35
ITGA4-202ENST00000339307 HMX1Q9NP08 348 aaPredicted RBP23.5■■□□□ 1.35
ITGA4-202ENST00000339307 PAK6Q9NQU5 681 aaPredicted RBP23.5■■□□□ 1.35
ITGA4-202ENST00000339307 SLFNL1Q499Z3 407 aa23.49■■□□□ 1.35
ITGA4-202ENST00000339307 CHRDL2Q6WN34 429 aa23.49■■□□□ 1.35
ITGA4-202ENST00000339307 UBE2Q1Q7Z7E8 422 aa23.49■■□□□ 1.35
ITGA4-202ENST00000339307 PCDH10Q9P2E7 1040 aa23.49■■□□□ 1.35
ITGA4-202ENST00000339307 NR2E3Q9Y5X4 410 aa23.49■■□□□ 1.35
ITGA4-202ENST00000339307 TCRBV5S4A2TA0A5A2 114 aa23.48■■□□□ 1.35
ITGA4-202ENST00000339307 EVX2Q03828 476 aa23.48■■□□□ 1.35
ITGA4-202ENST00000339307 SEPT2Q15019 361 aa23.48■■□□□ 1.35
ITGA4-202ENST00000339307 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
ITGA4-202ENST00000339307 LRRCC1Q9C099 1032 aa23.48■■□□□ 1.35
ITGA4-202ENST00000339307 KIAA1683Q9H0B3 1180 aa23.48■■□□□ 1.35
ITGA4-202ENST00000339307 PORCNQ9H237 461 aa23.48■■□□□ 1.35
ITGA4-202ENST00000339307 DCP1AQ9NPI6 582 aaPredicted RBP23.48■■□□□ 1.35
ITGA4-202ENST00000339307 NAV1Q8NEY1 1877 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 RPTORQ8N122 1335 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 SMARCA5O60264 1052 aaPredicted RBP23.47■■□□□ 1.35
ITGA4-202ENST00000339307 EVI5O60447 810 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 MBD4O95243 580 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 CYP2D6P10635 497 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 ATP5JP18859 108 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 VCAM1P19320 739 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 GPR142Q7Z601 462 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 PLEKHH3Q7Z736 793 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 TRIB2Q92519 343 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 PAWRQ96IZ0 340 aaKnown RBP23.47■■□□□ 1.35
ITGA4-202ENST00000339307 C12orf42Q96LP6 360 aa23.47■■□□□ 1.35
ITGA4-202ENST00000339307 PRKAB2O43741 272 aa23.46■■□□□ 1.35
ITGA4-202ENST00000339307 CATSPERGQ6ZRH7 1159 aa23.46■■□□□ 1.35
ITGA4-202ENST00000339307 ZKSCAN1P17029 563 aaPredicted RBP23.45■■□□□ 1.34
ITGA4-202ENST00000339307 CAPN2P17655 700 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 ADD2P35612 726 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 CCNA1P78396 465 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 AMOTL1Q8IY63 956 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 DDRGK1Q96HY6 314 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 HAUS7Q99871 368 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 CRISPLD2Q9H0B8 497 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 RPAP3Q9H6T3 665 aaPredicted RBP23.45■■□□□ 1.34
ITGA4-202ENST00000339307 RABGAP1Q9Y3P9 1069 aa23.45■■□□□ 1.34
ITGA4-202ENST00000339307 PRKAR2AP13861 404 aaKnown RBP23.44■■□□□ 1.34
ITGA4-202ENST00000339307 GUCY1A2P33402 732 aa23.44■■□□□ 1.34
ITGA4-202ENST00000339307 RGS2P41220 211 aa23.44■■□□□ 1.34
ITGA4-202ENST00000339307 GABPAQ06546 454 aa23.44■■□□□ 1.34
ITGA4-202ENST00000339307 NECAB2Q7Z6G3 386 aa23.44■■□□□ 1.34
ITGA4-202ENST00000339307 SLC44A5Q8NCS7 719 aa23.44■■□□□ 1.34
ITGA4-202ENST00000339307 DIS3LQ8TF46 1054 aaKnown RBP23.44■■□□□ 1.34
ITGA4-202ENST00000339307 DYNLL2Q96FJ2 89 aa23.44■■□□□ 1.34
ITGA4-202ENST00000339307 GLRX3O76003 335 aaKnown RBP23.43■■□□□ 1.34
ITGA4-202ENST00000339307 POTEEQ6S8J3 1075 aa23.43■■□□□ 1.34
ITGA4-202ENST00000339307 CHGBP05060 677 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 XRCC5P13010 732 aaKnown RBP23.42■■□□□ 1.34
ITGA4-202ENST00000339307 FXR1P51114 621 aaKnown RBP eCLIP23.42■■□□□ 1.34
ITGA4-202ENST00000339307 ZSCAN25Q6NSZ9 544 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 TRMT44Q8IYL2 757 aaKnown RBP23.42■■□□□ 1.34
ITGA4-202ENST00000339307 TANGO6Q9C0B7 1094 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 ATP8A2Q9NTI2 1148 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 SWAP70Q9UH65 585 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 PLXNB2O15031 1838 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 CNMDO75829 334 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 CCL14Q16627 93 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 SAMD1Q6SPF0 538 aaPredicted RBP23.42■■□□□ 1.34
ITGA4-202ENST00000339307 SLC4A4Q9Y6R1 1079 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 IVNS1ABPQ9Y6Y0 642 aa23.42■■□□□ 1.34
ITGA4-202ENST00000339307 CYP2D7A0A087X1C5 515 aa23.41■■□□□ 1.34
ITGA4-202ENST00000339307 MORN1Q5T089 497 aa23.41■■□□□ 1.34
ITGA4-202ENST00000339307 TMEM179Q6ZVK1 233 aa23.41■■□□□ 1.34
ITGA4-202ENST00000339307 RBM27Q9P2N5 1060 aaKnown RBP23.41■■□□□ 1.34
ITGA4-202ENST00000339307 DDX60LQ5H9U9 1706 aaKnown RBP23.4■■□□□ 1.34
ITGA4-202ENST00000339307 A0A1W2PRG0 241 aa23.4■■□□□ 1.34
ITGA4-202ENST00000339307 CACNB2Q08289 660 aaPredicted RBP23.4■■□□□ 1.34
ITGA4-202ENST00000339307 ANKLE1Q8NAG6 615 aa23.4■■□□□ 1.34
ITGA4-202ENST00000339307 APBA2Q99767 749 aa23.4■■□□□ 1.34
ITGA4-202ENST00000339307 ARHGEF10LQ9HCE6 1279 aa23.4■■□□□ 1.34
ITGA4-202ENST00000339307 BTBD7Q9P203 1132 aa23.4■■□□□ 1.34
ITGA4-202ENST00000339307 SPDYE16A6NNV3 312 aaPredicted RBP23.39■■□□□ 1.33
ITGA4-202ENST00000339307 USP17L12C9JPN9 530 aa23.39■■□□□ 1.33
ITGA4-202ENST00000339307 USP17L21D6R901 530 aa23.39■■□□□ 1.33
ITGA4-202ENST00000339307 ATP2B2Q01814 1243 aa23.39■■□□□ 1.33
ITGA4-202ENST00000339307 MAP2K5Q13163 448 aa23.39■■□□□ 1.33
ITGA4-202ENST00000339307 UBE3CQ15386 1083 aa23.39■■□□□ 1.33
ITGA4-202ENST00000339307 CLEC10AQ8IUN9 316 aa23.39■■□□□ 1.33
ITGA4-202ENST00000339307 NBPF3Q9H094 633 aa23.39■■□□□ 1.33
ITGA4-202ENST00000339307 AKR1B1P15121 316 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 COG2Q14746 738 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 SPICE1Q8N0Z3 855 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 USP6NLQ92738 828 aa23.38■■□□□ 1.33
ITGA4-202ENST00000339307 GPATCH3Q96I76 525 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms