RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 USP5P45974 858 aa19.05■□□□□ 0.64
LINC01116-202ENST00000339037 MNX1P50219 401 aaPredicted RBP19.05■□□□□ 0.64
LINC01116-202ENST00000339037 MAGEB6Q8N7X4 407 aa19.05■□□□□ 0.64
LINC01116-202ENST00000339037 PORCNQ9H237 461 aa19.05■□□□□ 0.64
LINC01116-202ENST00000339037 C11orf49Q9H6J7 331 aa19.05■□□□□ 0.64
LINC01116-202ENST00000339037 SERPINB13Q9UIV8 391 aa19.05■□□□□ 0.64
LINC01116-202ENST00000339037 ALPK3Q96L96 1907 aa19.04■□□□□ 0.64
LINC01116-202ENST00000339037 RGS2P41220 211 aa19.04■□□□□ 0.64
LINC01116-202ENST00000339037 Q3C1V9 767 aa19.04■□□□□ 0.64
LINC01116-202ENST00000339037 GPR142Q7Z601 462 aa19.04■□□□□ 0.64
LINC01116-202ENST00000339037 EHD4Q9H223 541 aa19.04■□□□□ 0.64
LINC01116-202ENST00000339037 ZMYND8Q9ULU4 1186 aaPredicted RBP19.04■□□□□ 0.64
LINC01116-202ENST00000339037 SOX1O00570 391 aaPredicted RBP19.03■□□□□ 0.64
LINC01116-202ENST00000339037 RLBP1P12271 317 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 MAP3K12Q12852 859 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 ZYXQ15942 572 aaKnown RBP19.03■□□□□ 0.64
LINC01116-202ENST00000339037 TATDN1Q6P1N9 297 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
LINC01116-202ENST00000339037 PLEKHH3Q7Z736 793 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 USP6NLQ92738 828 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 C12orf42Q96LP6 360 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 APBA2Q99767 749 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 GDF15Q99988 308 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
LINC01116-202ENST00000339037 NDUFB9Q9Y6M9 179 aa19.03■□□□□ 0.64
LINC01116-202ENST00000339037 DDX60LQ5H9U9 1706 aaKnown RBP19.03■□□□□ 0.64
LINC01116-202ENST00000339037 CUL9Q8IWT3 2517 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 BMP8BP34820 402 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 USP14P54578 494 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 CACNB2Q08289 660 aaPredicted RBP19.02■□□□□ 0.64
LINC01116-202ENST00000339037 RAB3GAP1Q15042 981 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 MORN1Q5T089 497 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 POTEEQ6S8J3 1075 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 TTC6Q86TZ1 520 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 LRCH3Q96II8 777 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 RABGAP1Q9Y3P9 1069 aa19.02■□□□□ 0.64
LINC01116-202ENST00000339037 USP17L15C9J2P7 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L13C9JLJ4 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L11C9JVI0 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L18D6R9N7 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L22D6RA61 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L17D6RBQ6 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L19D6RCP7 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L20D6RJB6 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 CCNA1P78396 465 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 USP17L24Q0WX57 530 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 CCL14Q16627 93 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 CERKLQ49MI3 558 aaPredicted RBP19.01■□□□□ 0.63
LINC01116-202ENST00000339037 CEP85Q6P2H3 762 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 AACSQ86V21 672 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 ERC1Q8IUD2 1116 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 ANTXR1Q9H6X2 564 aa19.01■□□□□ 0.63
LINC01116-202ENST00000339037 PFASO15067 1338 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 GLRX3O76003 335 aaKnown RBP19■□□□□ 0.63
LINC01116-202ENST00000339037 PRR29P0C7W0 189 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 SYN1P17600 705 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 VCAM1P19320 739 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 ABCB5Q2M3G0 1257 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 KIAA1683Q9H0B3 1180 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 EXOC6BQ9Y2D4 811 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 UNC80Q8N2C7 3258 aa19■□□□□ 0.63
LINC01116-202ENST00000339037 CCND3P30281 292 aaPredicted RBP18.99■□□□□ 0.63
LINC01116-202ENST00000339037 MAGEA10P43363 369 aaPredicted RBP18.99■□□□□ 0.63
LINC01116-202ENST00000339037 MAP2K5Q13163 448 aa18.99■□□□□ 0.63
LINC01116-202ENST00000339037 WDR78Q5VTH9 848 aa18.99■□□□□ 0.63
LINC01116-202ENST00000339037 ACER1Q8TDN7 264 aa18.99■□□□□ 0.63
LINC01116-202ENST00000339037 CABP5Q9NP86 173 aa18.99■□□□□ 0.63
LINC01116-202ENST00000339037 MYH1P12882 1939 aa18.99■□□□□ 0.63
LINC01116-202ENST00000339037 ZBED9Q6R2W3 1325 aa18.99■□□□□ 0.63
LINC01116-202ENST00000339037 CNMDO75829 334 aa18.98■□□□□ 0.63
LINC01116-202ENST00000339037 COL6A1P12109 1028 aa18.98■□□□□ 0.63
LINC01116-202ENST00000339037 LHX8Q68G74 356 aa18.98■□□□□ 0.63
LINC01116-202ENST00000339037 CATSPERGQ6ZRH7 1159 aa18.98■□□□□ 0.63
LINC01116-202ENST00000339037 RIOK1Q9BRS2 568 aaKnown RBP18.98■□□□□ 0.63
LINC01116-202ENST00000339037 PITPNM1O00562 1244 aa18.97■□□□□ 0.63
LINC01116-202ENST00000339037 SHMT1P34896 483 aa18.97■□□□□ 0.63
LINC01116-202ENST00000339037 PLCD1P51178 756 aa18.97■□□□□ 0.63
LINC01116-202ENST00000339037 TTF1Q15361 905 aaPredicted RBP18.97■□□□□ 0.63
LINC01116-202ENST00000339037 MFSD14CQ5VZR4 134 aa18.97■□□□□ 0.63
LINC01116-202ENST00000339037 LBX2Q6XYB7 198 aa18.97■□□□□ 0.63
LINC01116-202ENST00000339037 EDC3Q96F86 508 aaKnown RBP18.97■□□□□ 0.63
LINC01116-202ENST00000339037 IVNS1ABPQ9Y6Y0 642 aa18.97■□□□□ 0.63
LINC01116-202ENST00000339037 MAGEB6P1A0A0J9YX57 407 aa18.96■□□□□ 0.63
LINC01116-202ENST00000339037 POLR3DP05423 398 aaPredicted RBP18.96■□□□□ 0.63
LINC01116-202ENST00000339037 HSP90AB4PQ58FF6 505 aa18.96■□□□□ 0.63
LINC01116-202ENST00000339037 TDHQ8IZJ6 230 aa18.96■□□□□ 0.63
LINC01116-202ENST00000339037 RPAP3Q9H6T3 665 aaPredicted RBP18.96■□□□□ 0.63
LINC01116-202ENST00000339037 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
LINC01116-202ENST00000339037 SLC15A5A6NIM6 579 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 SPDYE16A6NNV3 312 aaPredicted RBP18.95■□□□□ 0.62
LINC01116-202ENST00000339037 PDE6AP16499 860 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 PTPREP23469 700 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 LRIT3Q3SXY7 679 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 GPR153Q6NV75 609 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 SLC17A8Q8NDX2 589 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
LINC01116-202ENST00000339037 UBE2OQ9C0C9 1292 aaKnown RBP18.95■□□□□ 0.62
LINC01116-202ENST00000339037 BTBD7Q9P203 1132 aa18.95■□□□□ 0.62
LINC01116-202ENST00000339037 HOXC6P09630 235 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms