RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 USP17L19D6RCP7 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L20D6RJB6 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 CNMDO75829 334 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 GLRX3O76003 335 aaKnown RBP14.05□□□□□ -0.16
CSMD2-202ENST00000338325 CYP7A1P22680 504 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L24Q0WX57 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 ZYXQ15942 572 aaKnown RBP14.05□□□□□ -0.16
CSMD2-202ENST00000338325 ZNF236Q9UL36 1845 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 BCAR3O75815 825 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 USP14P54578 494 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
CSMD2-202ENST00000338325 MFSD14CQ5VZR4 134 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 TATDN1Q6P1N9 297 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 SSH3Q8TE77 659 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 EDC3Q96F86 508 aaKnown RBP14.04□□□□□ -0.16
CSMD2-202ENST00000338325 EHD4Q9H223 541 aa14.04□□□□□ -0.16
CSMD2-202ENST00000338325 SLC15A5A6NIM6 579 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 SURF6O75683 361 aaKnown RBP14.03□□□□□ -0.16
CSMD2-202ENST00000338325 IDH1O75874 414 aaKnown RBP14.03□□□□□ -0.16
CSMD2-202ENST00000338325 USP5P45974 858 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 WDR78Q5VTH9 848 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 TMEM57Q8N5G2 664 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 KIAA1683Q9H0B3 1180 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 FLRT1Q9NZU1 646 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 SERPINB13Q9UIV8 391 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 DBNLQ9UJU6 430 aaKnown RBP14.03□□□□□ -0.16
CSMD2-202ENST00000338325 A0A0G2JMZ2 1700 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 RLFQ13129 1914 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 A0A0C4DFX4 3053 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 DNAH12Q6ZR08 3092 aa14.03□□□□□ -0.16
CSMD2-202ENST00000338325 MYH8P13535 1937 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 MSCO60682 206 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 VCAM1P19320 739 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 PTPREP23469 700 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 ATP8B2P98198 1209 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 RAB3GAP1Q15042 981 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 LBX2Q6XYB7 198 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 TLR7Q9NYK1 1049 aaKnown RBP14.02□□□□□ -0.16
CSMD2-202ENST00000338325 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.16
CSMD2-202ENST00000338325 NDUFB9Q9Y6M9 179 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 IVNS1ABPQ9Y6Y0 642 aa14.02□□□□□ -0.16
CSMD2-202ENST00000338325 HOXC6P09630 235 aa14.01□□□□□ -0.17
CSMD2-202ENST00000338325 GRB14Q14449 540 aa14.01□□□□□ -0.17
CSMD2-202ENST00000338325 ABCB5Q2M3G0 1257 aa14.01□□□□□ -0.17
CSMD2-202ENST00000338325 CERKLQ49MI3 558 aaPredicted RBP14.01□□□□□ -0.17
CSMD2-202ENST00000338325 TTC6Q86TZ1 520 aa14.01□□□□□ -0.17
CSMD2-202ENST00000338325 MAGEB6Q8N7X4 407 aa14.01□□□□□ -0.17
CSMD2-202ENST00000338325 SENP6Q9GZR1 1112 aaPredicted RBP14.01□□□□□ -0.17
CSMD2-202ENST00000338325 BTBD7Q9P203 1132 aa14.01□□□□□ -0.17
CSMD2-202ENST00000338325 CNGA1P29973 690 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 ATP2B2Q01814 1243 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 ZKSCAN2Q63HK3 967 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 ACER1Q8TDN7 264 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 LPAR1Q92633 364 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 LBHD1Q9BQE6 289 aaPredicted RBP14□□□□□ -0.17
CSMD2-202ENST00000338325 CCDC8Q9H0W5 538 aaPredicted RBP14□□□□□ -0.17
CSMD2-202ENST00000338325 CABP5Q9NP86 173 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
CSMD2-202ENST00000338325 CUL9Q8IWT3 2517 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 SPDYE16A6NNV3 312 aaPredicted RBP14□□□□□ -0.17
CSMD2-202ENST00000338325 DNM1LO00429 736 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 SHMT1P34896 483 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 FAM109BQ6ICB4 259 aaPredicted RBP14□□□□□ -0.17
CSMD2-202ENST00000338325 TMED8Q6PL24 325 aaPredicted RBP14□□□□□ -0.17
CSMD2-202ENST00000338325 NPLOC4Q8TAT6 608 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 RPAP3Q9H6T3 665 aaPredicted RBP14□□□□□ -0.17
CSMD2-202ENST00000338325 C1orf115Q9H7X2 142 aa14□□□□□ -0.17
CSMD2-202ENST00000338325 PARP14Q460N5 1801 aa13.99□□□□□ -0.17
CSMD2-202ENST00000338325 CYP2C19P33261 490 aa13.99□□□□□ -0.17
CSMD2-202ENST00000338325 ATN1P54259 1190 aaPredicted RBP13.99□□□□□ -0.17
CSMD2-202ENST00000338325 MAP3K12Q12852 859 aa13.99□□□□□ -0.17
CSMD2-202ENST00000338325 EAF2Q96CJ1 260 aaPredicted RBP13.99□□□□□ -0.17
CSMD2-202ENST00000338325 PRKAG2Q9UGJ0 569 aa13.99□□□□□ -0.17
CSMD2-202ENST00000338325 UNC80Q8N2C7 3258 aa13.99□□□□□ -0.17
CSMD2-202ENST00000338325 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
CSMD2-202ENST00000338325 CYBAP13498 195 aa13.98□□□□□ -0.17
CSMD2-202ENST00000338325 PLCD1P51178 756 aa13.98□□□□□ -0.17
CSMD2-202ENST00000338325 RTP1P59025 263 aa13.98□□□□□ -0.17
CSMD2-202ENST00000338325 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
CSMD2-202ENST00000338325 ANTXR1Q9H6X2 564 aa13.98□□□□□ -0.17
CSMD2-202ENST00000338325 ZNFX1Q9P2E3 1918 aaKnown RBP13.97□□□□□ -0.17
CSMD2-202ENST00000338325 CCER2I3L3R5 266 aa13.97□□□□□ -0.17
CSMD2-202ENST00000338325 IGHA2P01877 340 aa13.97□□□□□ -0.17
CSMD2-202ENST00000338325 GUCY1A2P33402 732 aa13.97□□□□□ -0.17
CSMD2-202ENST00000338325 OLFML2BQ68BL8 750 aa13.97□□□□□ -0.17
CSMD2-202ENST00000338325 GUCD1Q96NT3 240 aa13.97□□□□□ -0.17
CSMD2-202ENST00000338325 RIOK1Q9BRS2 568 aaKnown RBP13.97□□□□□ -0.17
CSMD2-202ENST00000338325 LAMA2P24043 3122 aaKnown RBP13.97□□□□□ -0.17
CSMD2-202ENST00000338325 POLR3DP05423 398 aaPredicted RBP13.96□□□□□ -0.17
CSMD2-202ENST00000338325 ADORA2AP29274 412 aa13.96□□□□□ -0.17
CSMD2-202ENST00000338325 GABPAQ06546 454 aa13.96□□□□□ -0.17
CSMD2-202ENST00000338325 SEPT2Q15019 361 aa13.96□□□□□ -0.17
CSMD2-202ENST00000338325 DPP9Q86TI2 863 aa13.96□□□□□ -0.17
CSMD2-202ENST00000338325 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
CSMD2-202ENST00000338325 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.17
CSMD2-202ENST00000338325 COL11A1P12107 1806 aaPredicted RBP13.96□□□□□ -0.17
CSMD2-202ENST00000338325 MAGEB6P1A0A0J9YX57 407 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms