RNA–Protein interactions for RNA: ENST00000336349.5

SPTY2D1-201, Transcript of SPT2 chromatin protein domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTY2D1, Length 5,754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTY2D1-201ENST00000336349 NSFL1CQ9UNZ2 370 aaKnown RBP13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 CCDC169A6NNP5 214 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 SMIM24O75264 130 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 IFNB1P01574 187 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 GSTO1P78417 241 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 OR8K1Q8NGG5 319 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 KRIT1O00522 736 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 GMNNO75496 209 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 CASC4Q6P4E1 433 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 SNX29Q8TEQ0 813 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 PHLDB2Q86SQ0 1253 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 CTAGE3PQ8IX95 158 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 TACC3Q9Y6A5 838 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 ITIH3Q06033 890 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 KCNJ12Q14500 433 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 LLGL1Q15334 1064 aa13.47□□□□□ -0.25
SPTY2D1-201ENST00000336349 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 GNAT2P19087 354 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 CLCN6P51797 869 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 MTMR3Q13615 1198 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 ADALQ6DHV7 355 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 GOLGA8KD6RF30 607 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 ZKSCAN8Q15776 578 aaPredicted RBP13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 CFAP61Q8NHU2 1237 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 EYA1Q99502 592 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 NAA30Q147X3 362 aaPredicted RBP13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 SH2D4BQ5SQS7 431 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 ARHGAP24Q8N264 748 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 FNBP1Q96RU3 617 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 PCDHA7Q9UN72 937 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 TRIM35Q9UPQ4 493 aa13.46□□□□□ -0.25
SPTY2D1-201ENST00000336349 I3L4J1 428 aa13.46□□□□□ -0.26
SPTY2D1-201ENST00000336349 BACH1O14867 736 aa13.46□□□□□ -0.26
SPTY2D1-201ENST00000336349 CRCPO75575 148 aa13.46□□□□□ -0.26
SPTY2D1-201ENST00000336349 FBXO38Q6PIJ6 1188 aa13.46□□□□□ -0.26
SPTY2D1-201ENST00000336349 C11orf57Q6ZUT1 292 aaPredicted RBP13.46□□□□□ -0.26
SPTY2D1-201ENST00000336349 CSRNP2Q9H175 543 aa13.46□□□□□ -0.26
SPTY2D1-201ENST00000336349 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.26
SPTY2D1-201ENST00000336349 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 NCAPH2Q6IBW4 605 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 LRWD1Q9UFC0 647 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 PDE6BP35913 854 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 MRFAP1L1Q96HT8 127 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 FTOQ9C0B1 505 aaKnown RBP eCLIP13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 NESP48681 1621 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 E7EWF7 191 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 AKAP4Q5JQC9 854 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 LSM14BQ9BX40 385 aaKnown RBP13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 PLB1Q6P1J6 1458 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 SH3BP5O60239 455 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 FNBP4Q8N3X1 1017 aaPredicted RBP13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 RBM28Q9NW13 759 aaKnown RBP13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 PCDHB13Q9Y5F0 798 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 PFDN1O60925 122 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 FLOT1O75955 427 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 CASP14P31944 242 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 CXCR5P32302 372 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 CCDC13Q8IYE1 715 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 CLIC4Q9Y696 253 aa13.45□□□□□ -0.26
SPTY2D1-201ENST00000336349 ADD1P35611 737 aaKnown RBP13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 RNF168Q8IYW5 571 aaPredicted RBP13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 HYOU1Q9Y4L1 999 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 MORC3Q14149 939 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 WDR44Q5JSH3 913 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 TRIM58Q8NG06 486 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 XAGE2Q96GT9 111 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 MED4Q9NPJ6 270 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 CD2APQ9Y5K6 639 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 A0A0D9SFI3 127 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 ZBTB22O15209 634 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 STX10O60499 249 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 FAM133BQ5BKY9 247 aaKnown RBP13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 SUCLG2Q96I99 432 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 KRT12Q99456 494 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 SPATS2LQ9NUQ6 558 aaKnown RBP13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 RIMBP2O15034 1052 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 MX2P20592 715 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 SLC8A1P32418 973 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 SNX16P57768 344 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 EHHADHQ08426 723 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 DPCR1Q3MIW9 517 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 SRGAP1Q7Z6B7 1085 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 N4BP2L2Q92802 583 aaPredicted RBP13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 TRIM6Q9C030 488 aaPredicted RBP13.44□□□□□ -0.26
SPTY2D1-201ENST00000336349 MAP7Q14244 749 aa13.43□□□□□ -0.26
SPTY2D1-201ENST00000336349 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
SPTY2D1-201ENST00000336349 PARD6BQ9BYG5 372 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms