RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 NID2Q14112 1375 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ACTN4O43707 911 aaKnown RBP13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 DDAH1O94760 285 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CCDC175P0C221 793 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 NT5DC1Q5TFE4 455 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ITPK1Q13572 414 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 GSDMAQ96QA5 445 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CARD6Q9BX69 1037 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PTGDRQ13258 359 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PIK3AP1Q6ZUJ8 805 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PHF20Q9BVI0 1012 aa13.29□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PES1O00541 588 aaKnown RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MCM7P33993 719 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SARSP49591 514 aaKnown RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CT47A1Q5JQC4 288 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 RIOK1Q9BRS2 568 aaKnown RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MORC2Q9Y6X9 1032 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 FAM47AQ5JRC9 791 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 STAMQ92783 540 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 HIBADHP31937 336 aaKnown RBP13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 KAT14Q9H8E8 782 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MTMR7Q9Y216 660 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MYH3P11055 1940 aa13.28□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 C4AP0C0L4 1744 aa13.27□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 C4BP0C0L5 1744 aa13.27□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 N4BP3O15049 544 aa13.27□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 KIF5CO60282 957 aa13.27□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ZNF18P17022 549 aa13.27□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 KARSQ15046 597 aaKnown RBP13.27□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SLC4A8Q2Y0W8 1093 aa13.27□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SCG2P13521 617 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CALML3P27482 149 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TROAPQ12815 778 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TEX35Q5T0J7 233 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CTR9Q6PD62 1173 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 REXO1L1PQ8IX06 675 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 FAM84BQ96KN1 310 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 DESI2Q9BSY9 194 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 INTS13Q9NVM9 706 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 MCM9Q9NXL9 1143 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TFCP2L1Q9NZI6 479 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 THRAP3Q9Y2W1 955 aaKnown RBP13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 EFCAB8A8MWE9 144 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SEMA3EO15041 775 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 USP5P45974 858 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 NBPF5PQ86XG9 351 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TC2NQ8N9U0 490 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SHANK3Q9BYB0 1731 aa13.27□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SMIM22K7EJ46 135 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 KIF20AO95235 890 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CASP1P29466 404 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 PKN1Q16512 942 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SMYD4Q8IYR2 804 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CCDC93Q567U6 631 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 NYXQ9GZU5 481 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 LZTFL1Q9NQ48 299 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 RMND1Q9NWS8 449 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CTNND2Q9UQB3 1225 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 NUP98P52948 1817 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CCDC194A0A1B0GVG4 234 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 MECOMQ03112 1051 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SPAG1Q07617 926 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SF3B3Q15393 1217 aaKnown RBP13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TSR1Q2NL82 804 aaKnown RBP13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TOGARAM2Q6ZUX3 1019 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CNGA4Q8IV77 575 aa13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 NAA15Q9BXJ9 866 aaKnown RBP13.26□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 ZPR1O75312 459 aa13.25□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 CCT6AP40227 531 aaKnown RBP13.25□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TRAPPC10P48553 1259 aa13.25□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 NR1I3Q14994 352 aa13.25□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 SPTY2D1Q68D10 685 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 TRIM65Q6PJ69 517 aa13.25□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P4Y-201ENST00000333235 BLZF1Q9H2G9 400 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms