RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 MCCP23508 829 aa11.58□□□□□ -0.56
SYN3-201ENST00000332840 MOGSQ13724 837 aa11.58□□□□□ -0.56
SYN3-201ENST00000332840 SH3D19Q5HYK7 790 aa11.58□□□□□ -0.56
SYN3-201ENST00000332840 GIMAP6Q6P9H5 292 aa11.58□□□□□ -0.56
SYN3-201ENST00000332840 SMCR8Q8TEV9 937 aaPredicted RBP11.58□□□□□ -0.56
SYN3-201ENST00000332840 ARPP21Q9UBL0 812 aaPredicted RBP11.58□□□□□ -0.56
SYN3-201ENST00000332840 USP17L10C9JJH3 530 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 EN2P19622 333 aaPredicted RBP11.57□□□□□ -0.56
SYN3-201ENST00000332840 USP14P54578 494 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 PRMT2P55345 433 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 BACE1P56817 501 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
SYN3-201ENST00000332840 GABPAQ06546 454 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 ABCB5Q2M3G0 1257 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 CERKLQ49MI3 558 aaPredicted RBP11.57□□□□□ -0.56
SYN3-201ENST00000332840 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 C17orf99Q6UX52 265 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 OTOP1Q7RTM1 612 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 SDR42E1Q8WUS8 393 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 ANO2Q9NQ90 1003 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 SLC4A4Q9Y6R1 1079 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 RAD50Q92878 1312 aa11.57□□□□□ -0.56
SYN3-201ENST00000332840 MGAMO43451 1857 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 GDF11O95390 407 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 GH2P01242 217 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 OSBPP22059 807 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 HOXD10P28358 340 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 GCLCP48506 637 aaPredicted RBP11.56□□□□□ -0.56
SYN3-201ENST00000332840 PLCD1P51178 756 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 HMGCS2P54868 508 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 MTMR2Q13614 643 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 RRP1BQ14684 758 aaKnown RBP11.56□□□□□ -0.56
SYN3-201ENST00000332840 SLC4A8Q2Y0W8 1093 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 CWC27Q6UX04 472 aaKnown RBP11.56□□□□□ -0.56
SYN3-201ENST00000332840 CD99L2Q8TCZ2 262 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 CCDC17Q96LX7 622 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
SYN3-201ENST00000332840 FEZ1Q99689 392 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 NACAP1Q9BZK3 213 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 PUS7LQ9H0K6 701 aaKnown RBP11.56□□□□□ -0.56
SYN3-201ENST00000332840 SH2D4AQ9H788 454 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 ZNF287Q9HBT7 754 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 ADGRA2Q96PE1 1338 aa11.56□□□□□ -0.56
SYN3-201ENST00000332840 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
SYN3-201ENST00000332840 SHMT1P34896 483 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
SYN3-201ENST00000332840 CAP1Q01518 475 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 NMIQ13287 307 aaPredicted RBP11.55□□□□□ -0.56
SYN3-201ENST00000332840 RABEP1Q15276 862 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 C12orf60Q5U649 245 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 USP17L2Q6R6M4 530 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 TMEM179Q6ZVK1 233 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 CCDC84Q86UT8 332 aaPredicted RBP11.55□□□□□ -0.56
SYN3-201ENST00000332840 GTF3C2Q8WUA4 911 aaPredicted RBP11.55□□□□□ -0.56
SYN3-201ENST00000332840 KIF2CQ99661 725 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
SYN3-201ENST00000332840 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 USP17L21D6R901 530 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 GPAA1O43292 621 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 PRKAB2O43741 272 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 CYP2C8P10632 490 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 BCRP11274 1271 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 HOXA7P31268 230 aaPredicted RBP11.54□□□□□ -0.56
SYN3-201ENST00000332840 FCGRTP55899 365 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 ANAPC15P60006 121 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 RAB3GAP1Q15042 981 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 FAM110CQ1W6H9 321 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 SBK1Q52WX2 424 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 IL27Q8NEV9 243 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 SNX21Q969T3 373 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 LSG1Q9H089 658 aaKnown RBP11.54□□□□□ -0.56
SYN3-201ENST00000332840 KIAA1683Q9H0B3 1180 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.54□□□□□ -0.56
SYN3-201ENST00000332840 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
SYN3-201ENST00000332840 DOCK1Q14185 1865 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
SYN3-201ENST00000332840 SLC3A2P08195 630 aaKnown RBP11.53□□□□□ -0.56
SYN3-201ENST00000332840 PSMC4P43686 418 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 TDO2P48775 406 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 FXR1P51114 621 aaKnown RBP eCLIP11.53□□□□□ -0.56
SYN3-201ENST00000332840 TREML2Q5T2D2 321 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 NBPF11Q86T75 865 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 FAM227BQ96M60 508 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 IL25Q9H293 177 aa11.53□□□□□ -0.56
SYN3-201ENST00000332840 GSG1L2A8MUP6 293 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
SYN3-201ENST00000332840 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
SYN3-201ENST00000332840 APPP05067 770 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 HSPA4P34932 840 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 JAG1P78504 1218 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 MCMDC2Q4G0Z9 681 aa11.52□□□□□ -0.57
SYN3-201ENST00000332840 ZMYM1Q5SVZ6 1142 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms