RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SLC27A3Q5K4L6 730 aa19.99■□□□□ 0.79
DDX28-201ENST00000332395 C12orf60Q5U649 245 aa19.99■□□□□ 0.79
DDX28-201ENST00000332395 UFL1O94874 794 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 CCDC144BQ3MJ40 725 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 LONRF3Q496Y0 759 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 SPECC1Q5M775 1068 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 KRBA2Q6ZNG9 492 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 CEP131Q9UPN4 1083 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 BAG3O95817 575 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 GRIN1Q05586 938 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 LRMPQ12912 555 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 PNOCQ13519 176 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 CNNM3Q8NE01 707 aa19.98■□□□□ 0.79
DDX28-201ENST00000332395 RBM17Q96I25 401 aaKnown RBP19.98■□□□□ 0.79
DDX28-201ENST00000332395 ATP2B1P20020 1258 aa19.97■□□□□ 0.79
DDX28-201ENST00000332395 RCSD1Q6JBY9 416 aa19.97■□□□□ 0.79
DDX28-201ENST00000332395 METTL16Q86W50 562 aaKnown RBP19.97■□□□□ 0.79
DDX28-201ENST00000332395 SRBD1Q8N5C6 995 aaKnown RBP19.97■□□□□ 0.79
DDX28-201ENST00000332395 ATP2B4P23634 1241 aa19.97■□□□□ 0.79
DDX28-201ENST00000332395 PPP4CP60510 307 aa19.97■□□□□ 0.79
DDX28-201ENST00000332395 NOL10Q9BSC4 688 aaKnown RBP19.97■□□□□ 0.79
DDX28-201ENST00000332395 QTRT2Q9H974 415 aaKnown RBP19.97■□□□□ 0.79
DDX28-201ENST00000332395 CD209Q9NNX6 404 aa19.97■□□□□ 0.79
DDX28-201ENST00000332395 GGA1Q9UJY5 639 aa19.97■□□□□ 0.79
DDX28-201ENST00000332395 SRPRBQ9Y5M8 271 aaKnown RBP19.97■□□□□ 0.79
DDX28-201ENST00000332395 FAM205CA6NFA0 338 aa19.96■□□□□ 0.79
DDX28-201ENST00000332395 ISM2Q6H9L7 571 aa19.96■□□□□ 0.79
DDX28-201ENST00000332395 ZNF579Q8NAF0 562 aaKnown RBP19.96■□□□□ 0.79
DDX28-201ENST00000332395 ROBO3Q96MS0 1386 aa19.96■□□□□ 0.79
DDX28-201ENST00000332395 NAV1Q8NEY1 1877 aa19.96■□□□□ 0.79
DDX28-201ENST00000332395 LDHCP07864 332 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 NT5C2P49902 561 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 TFAP4Q01664 338 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 EARS2Q5JPH6 523 aaKnown RBP19.95■□□□□ 0.78
DDX28-201ENST00000332395 CACTINQ8WUQ7 758 aaKnown RBP19.95■□□□□ 0.78
DDX28-201ENST00000332395 DYNLL2Q96FJ2 89 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 BRMS1Q9HCU9 246 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 PRDM4Q9UKN5 801 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 TRIM75PA6NK02 468 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 NCAPHQ15003 741 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 AMOTL1Q8IY63 956 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 ELOA2Q8IYF1 753 aaPredicted RBP19.95■□□□□ 0.78
DDX28-201ENST00000332395 TGFBRAP1Q8WUH2 860 aa19.95■□□□□ 0.78
DDX28-201ENST00000332395 SMTNL1A8MU46 457 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 BBOX1O75936 387 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 IL1R1P14778 569 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 DDR1Q08345 913 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 NPY5RQ15761 445 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 RTFDC1Q9BY42 306 aaPredicted RBP19.94■□□□□ 0.78
DDX28-201ENST00000332395 IL17RBQ9NRM6 502 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 MORC2Q9Y6X9 1032 aaPredicted RBP19.94■□□□□ 0.78
DDX28-201ENST00000332395 IKBKBO14920 756 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 TRIM37O94972 964 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 KIF5BP33176 963 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 TPM4P67936 248 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 DGKHQ86XP1 1220 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 KAT14Q9H8E8 782 aa19.94■□□□□ 0.78
DDX28-201ENST00000332395 SCG2P13521 617 aa19.93■□□□□ 0.78
DDX28-201ENST00000332395 HOXA10P31260 410 aaPredicted RBP19.93■□□□□ 0.78
DDX28-201ENST00000332395 MDM2Q00987 491 aaPredicted RBP19.93■□□□□ 0.78
DDX28-201ENST00000332395 FOXP4Q8IVH2 680 aaPredicted RBP19.93■□□□□ 0.78
DDX28-201ENST00000332395 TNFRSF25Q93038 417 aa19.93■□□□□ 0.78
DDX28-201ENST00000332395 MKNK2Q9HBH9 465 aa19.93■□□□□ 0.78
DDX28-201ENST00000332395 HOOK1Q9UJC3 728 aaKnown RBP19.93■□□□□ 0.78
DDX28-201ENST00000332395 PCDHA5Q9Y5H7 936 aa19.93■□□□□ 0.78
DDX28-201ENST00000332395 POLRMTO00411 1230 aaKnown RBP19.93■□□□□ 0.78
DDX28-201ENST00000332395 POLR2DO15514 142 aaKnown RBP19.93■□□□□ 0.78
DDX28-201ENST00000332395 CERS3Q8IU89 383 aa19.93■□□□□ 0.78
DDX28-201ENST00000332395 CSRNP2Q9H175 543 aa19.93■□□□□ 0.78
DDX28-201ENST00000332395 PODXL2Q9NZ53 605 aa19.93■□□□□ 0.78
DDX28-201ENST00000332395 FOXN1O15353 648 aa19.92■□□□□ 0.78
DDX28-201ENST00000332395 PFKFB3Q16875 520 aaPredicted RBP19.92■□□□□ 0.78
DDX28-201ENST00000332395 KRT27Q7Z3Y8 459 aa19.92■□□□□ 0.78
DDX28-201ENST00000332395 LRRC8AQ8IWT6 810 aa19.92■□□□□ 0.78
DDX28-201ENST00000332395 ANKS1AQ92625 1134 aa19.92■□□□□ 0.78
DDX28-201ENST00000332395 BTDP43251 543 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 MAPKAPK5Q8IW41 473 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 PNMA1Q8ND90 353 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 TBC1D16Q8TBP0 767 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 CRAMP1Q96RY5 1269 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 POLLQ9UGP5 575 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 BRWD3Q6RI45 1802 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 TSPY3P0CV98 308 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 TSPY8P0CW00 308 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 PLCD1P51178 756 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 POSTNQ15063 836 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 NOM1Q5C9Z4 860 aaKnown RBP19.91■□□□□ 0.78
DDX28-201ENST00000332395 FILIP1Q7Z7B0 1213 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 SMAP1Q8IYB5 467 aaPredicted RBP19.91■□□□□ 0.78
DDX28-201ENST00000332395 SAP30BPQ9UHR5 308 aaKnown RBP19.91■□□□□ 0.78
DDX28-201ENST00000332395 SERTAD1Q9UHV2 236 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 CDK5RAP2Q96SN8 1893 aa19.91■□□□□ 0.78
DDX28-201ENST00000332395 BAZ2BQ9UIF8 2168 aaKnown RBP19.91■□□□□ 0.78
DDX28-201ENST00000332395 GPR75-ASB3A0A0A6YYF3 556 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 NEMFO60524 1076 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 BMP15O95972 392 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 ARID5BQ14865 1188 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 CCDC178Q5BJE1 867 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 USP49Q70CQ1 688 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 SLC44A5Q8NCS7 719 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms