RNA–Protein interactions for RNA: ENST00000331587.8

CALCA-201, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-201ENST00000331587 ASCC2Q9H1I8 757 aaPredicted RBP17.62■□□□□ 0.41
CALCA-201ENST00000331587 GINM1Q9NU53 330 aa17.62■□□□□ 0.41
CALCA-201ENST00000331587 SLC45A1Q9Y2W3 748 aa17.62■□□□□ 0.41
CALCA-201ENST00000331587 ROBO3Q96MS0 1386 aa17.62■□□□□ 0.41
CALCA-201ENST00000331587 PATL2C9JE40 543 aaKnown RBP17.61■□□□□ 0.41
CALCA-201ENST00000331587 GSPT1P15170 499 aaKnown RBP17.61■□□□□ 0.41
CALCA-201ENST00000331587 TRIM47Q96LD4 638 aa17.61■□□□□ 0.41
CALCA-201ENST00000331587 EFCC1Q9HA90 598 aa17.61■□□□□ 0.41
CALCA-201ENST00000331587 ARPP21Q9UBL0 812 aaPredicted RBP17.61■□□□□ 0.41
CALCA-201ENST00000331587 SWAP70Q9UH65 585 aa17.61■□□□□ 0.41
CALCA-201ENST00000331587 APPP05067 770 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 RASA1P20936 1047 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 TDO2P48775 406 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 GIMAP6Q6P9H5 292 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
CALCA-201ENST00000331587 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 INCENPQ9NQS7 918 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 PTPN22Q9Y2R2 807 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 RLFQ13129 1914 aa17.6■□□□□ 0.41
CALCA-201ENST00000331587 C19orf81C9J6K1 198 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 PRDM1O75626 825 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 GNAT2P19087 354 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 SDSP20132 328 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 USP17L2Q6R6M4 530 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 ANKRD13CQ8N6S4 541 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 C12orf42Q96LP6 360 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 P2RX7Q99572 595 aaKnown RBP17.59■□□□□ 0.41
CALCA-201ENST00000331587 IL25Q9H293 177 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 PTCH2Q9Y6C5 1203 aa17.59■□□□□ 0.41
CALCA-201ENST00000331587 LRRFIP1Q32MZ4 808 aaKnown RBP17.58■□□□□ 0.4
CALCA-201ENST00000331587 TMEM179Q6ZVK1 233 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 FEZ1Q99689 392 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 KIAA1683Q9H0B3 1180 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 TXNRD2Q9NNW7 524 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 HELLSQ9NRZ9 838 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 TMOD4Q9NZQ9 345 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 PARP14Q460N5 1801 aa17.58■□□□□ 0.4
CALCA-201ENST00000331587 PLXNB2O15031 1838 aa17.57■□□□□ 0.4
CALCA-201ENST00000331587 VCAM1P19320 739 aa17.57■□□□□ 0.4
CALCA-201ENST00000331587 HOXA7P31268 230 aaPredicted RBP17.57■□□□□ 0.4
CALCA-201ENST00000331587 PSMC4P43686 418 aa17.57■□□□□ 0.4
CALCA-201ENST00000331587 CTDSPL2Q05D32 466 aa17.57■□□□□ 0.4
CALCA-201ENST00000331587 PKN2Q16513 984 aaKnown RBP17.57■□□□□ 0.4
CALCA-201ENST00000331587 TTC22Q5TAA0 569 aa17.57■□□□□ 0.4
CALCA-201ENST00000331587 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
CALCA-201ENST00000331587 SMCR8Q8TEV9 937 aaPredicted RBP17.57■□□□□ 0.4
CALCA-201ENST00000331587 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
CALCA-201ENST00000331587 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 OSBPP22059 807 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 SOX10P56693 466 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 ICA1Q05084 483 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 PPARAQ07869 468 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 MCMDC2Q4G0Z9 681 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 NKX2-3Q8TAU0 364 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 NAPBQ9H115 298 aa17.56■□□□□ 0.4
CALCA-201ENST00000331587 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 CNMDO75829 334 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 EEF2P13639 858 aaKnown RBP17.55■□□□□ 0.4
CALCA-201ENST00000331587 HERVK_113P62684 666 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 CCDC17Q96LX7 622 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 RPAP3Q9H6T3 665 aaPredicted RBP17.55■□□□□ 0.4
CALCA-201ENST00000331587 RBPJLQ9UBG7 517 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 PNMA3Q9UL41 463 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 A0A0G2JMZ2 1700 aa17.55■□□□□ 0.4
CALCA-201ENST00000331587 BRCA2P51587 3418 aa17.54■□□□□ 0.4
CALCA-201ENST00000331587 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
CALCA-201ENST00000331587 IGKV6D-41A0A0C4DH26 115 aa17.54■□□□□ 0.4
CALCA-201ENST00000331587 HSPD1P10809 573 aaKnown RBP17.54■□□□□ 0.4
CALCA-201ENST00000331587 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
CALCA-201ENST00000331587 FAM110CQ1W6H9 321 aa17.54■□□□□ 0.4
CALCA-201ENST00000331587 Q3C1V9 767 aa17.54■□□□□ 0.4
CALCA-201ENST00000331587 FAM47AQ5JRC9 791 aa17.54■□□□□ 0.4
CALCA-201ENST00000331587 SPICE1Q8N0Z3 855 aa17.54■□□□□ 0.4
CALCA-201ENST00000331587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
CALCA-201ENST00000331587 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
CALCA-201ENST00000331587 FGAP02671 866 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 USP14P54578 494 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 ATP2B2Q01814 1243 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 PRKCZQ05513 592 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.4
CALCA-201ENST00000331587 KIF22Q14807 665 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 CWC27Q6UX04 472 aaKnown RBP17.53■□□□□ 0.4
CALCA-201ENST00000331587 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 MKNK2Q9HBH9 465 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 SRRDQ9UH36 339 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 TMX2Q9Y320 296 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 LAMA4Q16363 1823 aa17.53■□□□□ 0.4
CALCA-201ENST00000331587 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
CALCA-201ENST00000331587 ALX1Q15699 326 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms