RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TAB2Q9NYJ8 693 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
CLN8-201ENST00000331222 DLATP10515 647 aaKnown RBP11.72□□□□□ -0.53
CLN8-201ENST00000331222 CSRNP2Q9H175 543 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 EBAG9O00559 213 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 KRT15P19012 456 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 CTAGE3PQ8IX95 158 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 SPC25Q9HBM1 224 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 USP21Q9UK80 565 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 NLRC4Q9NPP4 1024 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 TNRQ92752 1358 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 GSTA1P08263 222 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 GSTA2P09210 222 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
CLN8-201ENST00000331222 DLGAP5Q15398 846 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 ERCC6LQ2NKX8 1250 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 UVSSAQ2YD98 709 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
CLN8-201ENST00000331222 USP40Q9NVE5 1235 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 IFT140Q96RY7 1462 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 RNMTO43148 476 aaKnown RBP11.71□□□□□ -0.53
CLN8-201ENST00000331222 GPAA1O43292 621 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
CLN8-201ENST00000331222 NME8Q8N427 588 aa11.71□□□□□ -0.53
CLN8-201ENST00000331222 ARID4AP29374 1257 aaPredicted RBP11.71□□□□□ -0.54
CLN8-201ENST00000331222 HP1BP3Q5SSJ5 553 aaPredicted RBP11.71□□□□□ -0.54
CLN8-201ENST00000331222 HHATQ5VTY9 493 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 C8orf74Q6P047 294 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 NBPF11Q86T75 865 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 ATF7P17544 494 aaPredicted RBP11.71□□□□□ -0.54
CLN8-201ENST00000331222 TTF2Q9UNY4 1162 aaKnown RBP11.71□□□□□ -0.54
CLN8-201ENST00000331222 TECP42680 631 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 UBXN2AP68543 259 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.54
CLN8-201ENST00000331222 EEF2KMTQ96G04 330 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 NBPF3Q9H094 633 aa11.71□□□□□ -0.54
CLN8-201ENST00000331222 ELP1O95163 1332 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 IFNB1P01574 187 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 U2AF2P26368 475 aaKnown RBP eCLIP11.7□□□□□ -0.544e-7■■■■■ 30.7
CLN8-201ENST00000331222 G2E3Q7L622 706 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 KIAA0825Q8IV33 1275 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 EXOC7Q9UPT5 735 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 UHMK1Q8TAS1 419 aaKnown RBP11.7□□□□□ -0.54
CLN8-201ENST00000331222 WHAMMQ8TF30 809 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 MCUR1Q96AQ8 359 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 UNC13AQ9UPW8 1703 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 FANCAO15360 1455 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 HAUS3Q68CZ6 603 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 RBSNQ9H1K0 784 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 PCDH11XQ9BZA7 1347 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 PCDH11YQ9BZA8 1340 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
CLN8-201ENST00000331222 KIF3CO14782 793 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 BNIP3LO60238 219 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 ADCY7P51828 1080 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 EVCP57679 992 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 NELFBQ8WX92 580 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLN8-201ENST00000331222 IVLP07476 585 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 CCDC62Q6P9F0 684 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 AFAP1L2Q8N4X5 818 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 NOX5Q96PH1 765 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
CLN8-201ENST00000331222 FIS1Q9Y3D6 152 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 CUL7Q14999 1698 aa11.7□□□□□ -0.54
CLN8-201ENST00000331222 LLGL1Q15334 1064 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 DEPTORQ8TB45 409 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 GOLGA8HP0CJ92 632 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 FAM182BQ5T319 152 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 TRIM50Q86XT4 487 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 KRT12Q99456 494 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 CLRN2A0PK11 232 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 CETN3O15182 167 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 ABCC1P33527 1531 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 TTC38Q5R3I4 469 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 SPICE1Q8N0Z3 855 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 SDR42E1Q8WUS8 393 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 MAP3K5Q99683 1374 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 LSM14BQ9BX40 385 aaKnown RBP11.69□□□□□ -0.54
CLN8-201ENST00000331222 SLC27A2O14975 620 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 PRR16Q569H4 304 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 PHLDB2Q86SQ0 1253 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 SULF1Q8IWU6 871 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 GAS7O60861 476 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
CLN8-201ENST00000331222 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 RTEL1Q9NZ71 1219 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 GCP02774 474 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 ATP5DP30049 168 aa11.69□□□□□ -0.54
CLN8-201ENST00000331222 PAK1Q13153 545 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms