RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 IGSF22Q8N9C0 903 aa20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 KRI1Q8N9T8 703 aaKnown RBP20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 NAPGQ99747 312 aaPredicted RBP20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 TAOK2Q9UL54 1235 aa20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 SPECC1Q5M775 1068 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 CDC5LQ99459 802 aaKnown RBP20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 MYH14Q7Z406 1995 aaKnown RBP20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 ANKRD36CQ5JPF3 1778 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 WDR19Q8NEZ3 1342 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 MFAP3LO75121 409 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 AARSP49588 968 aaKnown RBP eCLIP20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 WDR93Q6P2C0 686 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 APTXQ7Z2E3 356 aaKnown RBP20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 NOA1Q8NC60 698 aaKnown RBP20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 AFAP1L1Q8TED9 768 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 CPLX3Q8WVH0 158 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 NCAPGQ9BPX3 1015 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 GPR108Q9NPR9 543 aa20.53■□□□□ 0.88
CLSTN3-202ENST00000331148 FGAP02671 866 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 PLCD1P51178 756 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 SLC9C2Q5TAH2 1124 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 TRIML1Q8N9V2 468 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 VIPAS39Q9H9C1 493 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 TOMM22Q9NS69 142 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 TTF2Q9UNY4 1162 aaKnown RBP20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 CDKL5O76039 1030 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 ZNF34Q8IZ26 560 aa20.52■□□□□ 0.88
CLSTN3-202ENST00000331148 CDHR2Q9BYE9 1310 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 PBX1P40424 430 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 METAP2P50579 478 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 SUGP1Q8IWZ8 645 aaKnown RBP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 STK11IPQ8N1F8 1099 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 ACRBPQ8NEB7 543 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 DEF6Q9H4E7 631 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 NHSQ6T4R5 1651 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 PRPF6O94906 941 aaKnown RBP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 SYF2O95926 243 aaKnown RBP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 DNAJC21Q5F1R6 531 aaKnown RBP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 TADA2BQ86TJ2 420 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 GRAMD1CQ8IYS0 662 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 LINC00116Q8NCU8 138 aa20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 MYCBPQ99417 103 aaPredicted RBP20.51■□□□□ 0.87
CLSTN3-202ENST00000331148 BTAF1O14981 1849 aa20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 SPEF2Q9C093 1822 aa20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 ERCC5P28715 1186 aaPredicted RBP20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 PHKBQ93100 1093 aa20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 TRMT112Q9UI30 125 aaKnown RBP20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 POLR2DO15514 142 aaKnown RBP20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 CAMTA2O94983 1202 aa20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 FECHP22830 423 aa20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 TRDNQ13061 729 aa20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 WASHC4Q2M389 1173 aa20.5■□□□□ 0.87
CLSTN3-202ENST00000331148 ABL1P00519 1130 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 CSF1RP07333 972 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 KCNQ4P56696 695 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 AMPD2Q01433 879 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 GRIN1Q05586 938 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 TRIM29Q14134 588 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 MMS22LQ6ZRQ5 1243 aa20.49■□□□□ 0.87
CLSTN3-202ENST00000331148 A0A087WUV0 522 aaPredicted RBP20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 LOC102724159A0A0B4J2E5 919 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 RXRAP19793 462 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 CASP14P31944 242 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 PWP2Q15269 919 aaKnown RBP20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 SEC31BQ9NQW1 1179 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 MYO1AQ9UBC5 1043 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 ADD3Q9UEY8 706 aaKnown RBP20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 ANGEL1Q9UNK9 670 aaKnown RBP20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 UBN2Q6ZU65 1347 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 ARHGAP25P42331 645 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 NCAPH2Q6IBW4 605 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 PAXIP1Q6ZW49 1069 aaPredicted RBP20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 CNGA4Q8IV77 575 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 CCDC51Q96ER9 411 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 FBXO2Q9UK22 296 aaPredicted RBP20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 HPCAL4Q9UM19 191 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 MYO6Q9UM54 1294 aa20.48■□□□□ 0.87
CLSTN3-202ENST00000331148 ZNF213O14771 459 aa20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 IL15P40933 162 aaPredicted RBP20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 CPLX2Q6PUV4 134 aaKnown RBP20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 CCDC148Q8NFR7 591 aa20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 WWC3Q9ULE0 1092 aa20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 IRS4O14654 1257 aaPredicted RBP20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 GYPCP04921 128 aa20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 FKBP4Q02790 459 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 SART3Q15020 963 aaKnown RBP20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 SPATA1Q5VX52 437 aa20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 FAM107BQ9H098 131 aa20.47■□□□□ 0.87
CLSTN3-202ENST00000331148 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
CLSTN3-202ENST00000331148 EYA2O00167 538 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms