RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 XAGE2Q96GT9 111 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 CEP89Q96ST8 783 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
GINS3-202ENST00000328514 CDHR2Q9BYE9 1310 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 BTBD18B2RXH4 712 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 PPP1R3GB7ZBB8 358 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
GINS3-202ENST00000328514 RCAN1P53805 252 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 PAPD7Q5XG87 772 aaKnown RBP12.74□□□□□ -0.37
GINS3-202ENST00000328514 MICU3Q86XE3 530 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 ACRBPQ8NEB7 543 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 ROBO1Q9Y6N7 1651 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 ADD2P35612 726 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 SPAG1Q07617 926 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 UBE3CQ15386 1083 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 GRAMD1CQ8IYS0 662 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 NKX2-3Q8TAU0 364 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 MTA3Q9BTC8 594 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 DEF6Q9H4E7 631 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
GINS3-202ENST00000328514 PKD1L3Q7Z443 1732 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 PHACTR2O75167 634 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 ABL1P00519 1130 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 TFRCP02786 760 aaKnown RBP12.73□□□□□ -0.37
GINS3-202ENST00000328514 ADORA1P30542 326 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 ZAP70P43403 619 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 DPYDQ12882 1025 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 SCARF1Q14162 830 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 RUBCNQ92622 972 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 ZNF594Q96JF6 807 aaPredicted RBP12.73□□□□□ -0.37
GINS3-202ENST00000328514 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
GINS3-202ENST00000328514 DENND2AQ9ULE3 1009 aa12.73□□□□□ -0.37
GINS3-202ENST00000328514 RXRAP19793 462 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 STIM1Q13586 685 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 PAGE5Q96GU1 130 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 MYCBPQ99417 103 aaPredicted RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 CSRNP2Q9H175 543 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 PCDHB6Q9Y5E3 794 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 AKAP11Q9UKA4 1901 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 B4E1Z4 1266 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 DEXIO95424 95 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 CKAP4Q07065 602 aaKnown RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 KRT31Q15323 416 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 TTF1Q15361 905 aaPredicted RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 TMEM67Q5HYA8 995 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 MCTP2Q6DN12 878 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 NCAPH2Q6IBW4 605 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 GBP6Q6ZN66 633 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 TRIM22Q8IYM9 498 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 REXO2Q9Y3B8 237 aaKnown RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
GINS3-202ENST00000328514 EPN1Q9Y6I3 576 aaPredicted RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
GINS3-202ENST00000328514 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 A6NNZ2 444 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 NDUFA10O95299 355 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 BMP15O95972 392 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 RXRBP28702 533 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 TUBB8Q3ZCM7 444 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 USP49Q70CQ1 688 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 FERMT2Q96AC1 680 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
GINS3-202ENST00000328514 RWDD2AQ9UIY3 292 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 SAR1BQ9Y6B6 198 aa12.71□□□□□ -0.37
GINS3-202ENST00000328514 TRPM3Q9HCF6 1732 aaPredicted RBP12.7□□□□□ -0.38
GINS3-202ENST00000328514 A0A087X0B3 334 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 AGPSO00116 658 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 EXOC5O00471 708 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
GINS3-202ENST00000328514 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 GSCP56915 257 aaPredicted RBP12.7□□□□□ -0.38
GINS3-202ENST00000328514 CCNI2Q6ZMN8 369 aaPredicted RBP12.7□□□□□ -0.38
GINS3-202ENST00000328514 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 DNAJC7Q99615 494 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 CNNM2Q9H8M5 875 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 MEGF6O75095 1541 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 ANO9A1A5B4 782 aa12.7□□□□□ -0.38
GINS3-202ENST00000328514 UBE2Q2LH0YL09 131 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms