RNA–Protein interactions for RNA: ENST00000325558.10

PGA3-201, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGA3, Length 1,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-201ENST00000325558 ZNF500O60304 480 aaPredicted RBP13.05□□□□□ -0.32
PGA3-201ENST00000325558 PFKFB1P16118 471 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 NR5A1Q13285 461 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 GRM4Q14833 912 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 SAFBQ15424 915 aaKnown RBP eCLIP13.05□□□□□ -0.32
PGA3-201ENST00000325558 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 MPNDQ8N594 471 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
PGA3-201ENST00000325558 KIAA1468Q9P260 1216 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
PGA3-201ENST00000325558 DAGLAQ9Y4D2 1042 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 TSPY2A6NKD2 308 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
PGA3-201ENST00000325558 ZNF165P49910 485 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 GTF2IP78347 998 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 GABPAQ06546 454 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 PFKFB3Q16875 520 aaPredicted RBP13.05□□□□□ -0.32
PGA3-201ENST00000325558 EARS2Q5JPH6 523 aaKnown RBP13.05□□□□□ -0.32
PGA3-201ENST00000325558 OLFM4Q6UX06 510 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 C11orf57Q6ZUT1 292 aaPredicted RBP13.05□□□□□ -0.32
PGA3-201ENST00000325558 JMYQ8N9B5 988 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 MRIQ9BWK5 157 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 DNAJC25Q9H1X3 360 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 TUBE1Q9UJT0 475 aa13.05□□□□□ -0.32
PGA3-201ENST00000325558 FLT1P17948 1338 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
PGA3-201ENST00000325558 VEGFAP15692 232 aaPredicted RBP13.04□□□□□ -0.32
PGA3-201ENST00000325558 CDK8P49336 464 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 STX1AQ16623 288 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 MAPKAPK5Q8IW41 473 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
PGA3-201ENST00000325558 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 NOL10Q9BSC4 688 aaKnown RBP13.04□□□□□ -0.32
PGA3-201ENST00000325558 VPS54Q9P1Q0 977 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
PGA3-201ENST00000325558 USP17L3A6NCW0 530 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 USP17L4A6NCW7 530 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
PGA3-201ENST00000325558 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
PGA3-201ENST00000325558 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 USP17L1Q7RTZ2 530 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 BPIFA3Q9BQP9 254 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
PGA3-201ENST00000325558 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
PGA3-201ENST00000325558 PLIN4Q96Q06 1357 aa13.03□□□□□ -0.32
PGA3-201ENST00000325558 BAZ2BQ9UIF8 2168 aaKnown RBP13.02□□□□□ -0.32
PGA3-201ENST00000325558 M0R2N6 131 aa13.02□□□□□ -0.32
PGA3-201ENST00000325558 SCG2P13521 617 aa13.02□□□□□ -0.32
PGA3-201ENST00000325558 HHIPL2Q6UWX4 724 aa13.02□□□□□ -0.32
PGA3-201ENST00000325558 DHX40Q8IX18 779 aaKnown RBP13.02□□□□□ -0.32
PGA3-201ENST00000325558 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.32
PGA3-201ENST00000325558 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.32
PGA3-201ENST00000325558 PNMA1Q8ND90 353 aa13.02□□□□□ -0.32
PGA3-201ENST00000325558 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.32
PGA3-201ENST00000325558 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.32
PGA3-201ENST00000325558 ANO10Q9NW15 660 aa13.02□□□□□ -0.32
PGA3-201ENST00000325558 GREB1LQ9C091 1923 aaPredicted RBP13.02□□□□□ -0.32
PGA3-201ENST00000325558 SCN9AQ15858 1988 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 IGKV6D-41A0A0C4DH26 115 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 hCG_1642624A0A1W2PR95 340 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 FAM205CA6NFA0 338 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 CYTH3O43739 400 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 XBP1P17861 261 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 KIF5BP33176 963 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 KRT2P35908 639 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
PGA3-201ENST00000325558 GRIN1Q05586 938 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.33
PGA3-201ENST00000325558 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.33
PGA3-201ENST00000325558 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 SDF4Q9BRK5 362 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
PGA3-201ENST00000325558 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 WNT7AO00755 349 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 ADAMTS3O15072 1205 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 SYKP43405 635 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 GNAQP50148 359 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
PGA3-201ENST00000325558 APOBEC3HQ6NTF7 200 aaKnown RBP13.01□□□□□ -0.33
PGA3-201ENST00000325558 DPP8Q6V1X1 898 aaPredicted RBP13.01□□□□□ -0.33
PGA3-201ENST00000325558 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 KAT14Q9H8E8 782 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
PGA3-201ENST00000325558 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
PGA3-201ENST00000325558 SAP30BPQ9UHR5 308 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms