RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 AKAP17AQ02040 695 aaKnown RBP22.61■■□□□ 1.21
CRLF3-201ENST00000324238 MAPK8IP2Q13387 824 aaPredicted RBP22.61■■□□□ 1.21
CRLF3-201ENST00000324238 CC2D1AQ6P1N0 951 aaPredicted RBP22.61■■□□□ 1.21
CRLF3-201ENST00000324238 ZNF34Q8IZ26 560 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 RNF225M0QZC1 329 aaPredicted RBP22.6■■□□□ 1.21
CRLF3-201ENST00000324238 CHRNDQ07001 517 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 WWC2Q6AWC2 1192 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 C3orf67Q6ZVT6 689 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 FOXP1Q9H334 677 aaPredicted RBP22.6■■□□□ 1.21
CRLF3-201ENST00000324238 SUGCTQ9HAC7 445 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 MYH7P12883 1935 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 AKR1B15C9JRZ8 316 aaPredicted RBP22.6■■□□□ 1.21
CRLF3-201ENST00000324238 IGHMBP2P38935 993 aaKnown RBP22.6■■□□□ 1.21
CRLF3-201ENST00000324238 ALX1Q15699 326 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 PAGE5Q96GU1 130 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 CDC5LQ99459 802 aaKnown RBP22.6■■□□□ 1.21
CRLF3-201ENST00000324238 CNNM2Q9H8M5 875 aa22.6■■□□□ 1.21
CRLF3-201ENST00000324238 TRIM75PA6NK02 468 aa22.59■■□□□ 1.21
CRLF3-201ENST00000324238 OAS2P29728 719 aaKnown RBP22.59■■□□□ 1.21
CRLF3-201ENST00000324238 PLCD1P51178 756 aa22.59■■□□□ 1.21
CRLF3-201ENST00000324238 ZFP91Q96JP5 570 aaPredicted RBP22.59■■□□□ 1.21
CRLF3-201ENST00000324238 ZNF512BQ96KM6 892 aaPredicted RBP22.59■■□□□ 1.21
CRLF3-201ENST00000324238 VPS16Q9H269 839 aa22.59■■□□□ 1.21
CRLF3-201ENST00000324238 ITPK1Q13572 414 aa22.59■■□□□ 1.21
CRLF3-201ENST00000324238 ZNF569Q5MCW4 686 aa22.59■■□□□ 1.21
CRLF3-201ENST00000324238 PPFIBP1Q86W92 1011 aa22.59■■□□□ 1.21
CRLF3-201ENST00000324238 CTNND2Q9UQB3 1225 aa22.59■■□□□ 1.21
CRLF3-201ENST00000324238 FXR1P51114 621 aaKnown RBP eCLIP22.59■■□□□ 1.21
CRLF3-201ENST00000324238 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
CRLF3-201ENST00000324238 GTF2E1P29083 439 aaPredicted RBP22.58■■□□□ 1.21
CRLF3-201ENST00000324238 IL6STP40189 918 aaPredicted RBP22.58■■□□□ 1.21
CRLF3-201ENST00000324238 APTXQ7Z2E3 356 aaKnown RBP22.58■■□□□ 1.21
CRLF3-201ENST00000324238 STAG1Q8WVM7 1258 aa22.58■■□□□ 1.21
CRLF3-201ENST00000324238 TFR2Q9UP52 801 aa22.58■■□□□ 1.21
CRLF3-201ENST00000324238 STK36Q9NRP7 1315 aa22.58■■□□□ 1.21
CRLF3-201ENST00000324238 PKN1Q16512 942 aa22.58■■□□□ 1.2
CRLF3-201ENST00000324238 ENAHQ8N8S7 591 aaPredicted RBP22.58■■□□□ 1.2
CRLF3-201ENST00000324238 RNF216Q9NWF9 866 aaPredicted RBP22.58■■□□□ 1.2
CRLF3-201ENST00000324238 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 SYNRGQ9UMZ2 1314 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 SLC51AQ86UW1 340 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 ATRNO75882 1429 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 RHOXF2BP0C7M4 288 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 RHOXF2Q9BQY4 288 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 CCDC87Q9NVE4 849 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 ADGRG1Q9Y653 693 aa22.57■■□□□ 1.2
CRLF3-201ENST00000324238 A0A1B0GTH6 734 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 CCDC175P0C221 793 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 HNRNPH2P55795 449 aaKnown RBP22.56■■□□□ 1.2
CRLF3-201ENST00000324238 MCM6Q14566 821 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 SMC1AQ14683 1233 aaKnown RBP22.56■■□□□ 1.2
CRLF3-201ENST00000324238 NT5DC1Q5TFE4 455 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 PLIN2Q99541 437 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 SRRTQ9BXP5 876 aaKnown RBP22.56■■□□□ 1.2
CRLF3-201ENST00000324238 BCL9O00512 1426 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 FAM47AQ5JRC9 791 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 EIF5P55010 431 aaKnown RBP22.56■■□□□ 1.2
CRLF3-201ENST00000324238 DHX8Q14562 1220 aaKnown RBP22.56■■□□□ 1.2
CRLF3-201ENST00000324238 TAB2Q9NYJ8 693 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 DACH1Q9UI36 760 aa22.56■■□□□ 1.2
CRLF3-201ENST00000324238 TOGARAM1Q9Y4F4 1720 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 KLRK1P26718 216 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 PTGDRQ13258 359 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 FCHSD1Q86WN1 690 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 PARP4Q9UKK3 1724 aaKnown RBP22.55■■□□□ 1.2
CRLF3-201ENST00000324238 ECM29Q5VYK3 1845 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 LOC102724428A0A0B4J2F2 783 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 PES1O00541 588 aaKnown RBP22.55■■□□□ 1.2
CRLF3-201ENST00000324238 TUBB4AP04350 444 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 MCM7P33993 719 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 SIK1P57059 783 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 KIF4BQ2VIQ3 1234 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 CCDC152Q4G0S7 254 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 ARFGAP3Q9NP61 516 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 TFCP2L1Q9NZI6 479 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 UBR2Q8IWV8 1755 aa22.55■■□□□ 1.2
CRLF3-201ENST00000324238 CYP2C19P33261 490 aa22.54■■□□□ 1.2
CRLF3-201ENST00000324238 DDB1Q16531 1140 aa22.54■■□□□ 1.2
CRLF3-201ENST00000324238 RSRC2Q7L4I2 434 aaKnown RBP22.54■■□□□ 1.2
CRLF3-201ENST00000324238 SPATA1Q5VX52 437 aa22.54■■□□□ 1.2
CRLF3-201ENST00000324238 RRAGBQ5VZM2 374 aa22.54■■□□□ 1.2
CRLF3-201ENST00000324238 PIK3AP1Q6ZUJ8 805 aa22.54■■□□□ 1.2
CRLF3-201ENST00000324238 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.54■■□□□ 1.2
CRLF3-201ENST00000324238 TRIM10Q9UDY6 481 aa22.54■■□□□ 1.2
CRLF3-201ENST00000324238 ADD3Q9UEY8 706 aaKnown RBP22.54■■□□□ 1.2
CRLF3-201ENST00000324238 CCDC196A0A1B0GTZ2 297 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 PPP1R3GB7ZBB8 358 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 KRT2P35908 639 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 CUL4BQ13620 913 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 SEC23AQ15436 765 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 ERFEQ4G0M1 354 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 IFIT1BQ5T764 474 aaKnown RBP22.53■■□□□ 1.2
CRLF3-201ENST00000324238 SLC35F6Q8N357 371 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 GYPCP04921 128 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 CHMP4BP1P59074 171 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 GPR161Q8N6U8 529 aaKnown RBP22.53■■□□□ 1.2
CRLF3-201ENST00000324238 PNKPQ96T60 521 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 MAGEB6P1A0A0J9YX57 407 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 H3BQF6 201 aa22.53■■□□□ 1.2
CRLF3-201ENST00000324238 N4BP3O15049 544 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms