RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 EAF2Q96CJ1 260 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 NKIRAS1Q9NYS0 192 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 UGGT1Q9NYU2 1555 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 KRT9P35527 623 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 PKP1Q13835 747 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 CLUL1Q15846 466 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 IFNL3Q8IZI9 196 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 EFCAB6Q5THR3 1501 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 ADKP55263 362 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 STRN3Q13033 797 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 MORC3Q14149 939 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 ZNF500O60304 480 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 TFAP4Q01664 338 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 SPATA24Q86W54 205 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 BIN2Q9UBW5 565 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 IFT74Q96LB3 600 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 MYCT1Q8N699 235 aa12.14□□□□□ -0.47
SNRNP200-201ENST00000323853 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 GNA14O95837 355 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 CDC25BP30305 580 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 ALDH3A1P30838 453 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 C10orf67Q8IYJ2 551 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 KDM3AQ9Y4C1 1321 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 USH1GQ495M9 461 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 CEP57Q86XR8 500 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 NELFCDQ8IXH7 590 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 GOLGA6BA6NDN3 693 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 GCNT3O95395 438 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 VIMP08670 466 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 ERCC5P28715 1186 aaPredicted RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 SCRN1Q12765 414 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 CCDC14Q49A88 953 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 DDX17Q92841 729 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 NUCKS1Q9H1E3 243 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 RASSF4Q9H2L5 321 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 MRPL44Q9H9J2 332 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 DDX39AO00148 427 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 CMA1P23946 247 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 MAGEA1P43355 309 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 HERC4Q5GLZ8 1057 aaPredicted RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 ZBTB38Q8NAP3 1195 aaPredicted RBP12.13□□□□□ -0.47
SNRNP200-201ENST00000323853 STX10O60499 249 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 CFAP221Q4G0U5 840 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 LSM14BQ9BX40 385 aaKnown RBP12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 TXNDC16Q9P2K2 825 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 KLHL30Q0D2K2 578 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 CMTR1Q8N1G2 835 aaKnown RBP12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 STAMQ92783 540 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 TRIM7Q9C029 511 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 FAM169AQ9Y6X4 670 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 SMCO2A6NFE2 343 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 HARSP12081 509 aaKnown RBP12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 PAK2Q13177 524 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 WHAMMP3Q1A5X7 153 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 KLHL7Q8IXQ5 586 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 HSPA2P54652 639 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 A6NNZ2 444 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 CEP104O60308 925 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 DDAH1O94760 285 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 LRRC24Q50LG9 513 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 LRRC8AQ8IWT6 810 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 BLIDQ8IZY5 108 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 KIAA1524Q8TCG1 905 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 DKC1O60832 514 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 SLC1A4P43007 532 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 UAP1Q16222 522 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 OSBPL3Q9H4L5 887 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
SNRNP200-201ENST00000323853 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 NT5C3AQ9H0P0 336 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 PLCB1Q9NQ66 1216 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 PICK1Q9NRD5 415 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 NDUFA8P51970 172 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 MTMR3Q13615 1198 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 RRAGAQ7L523 313 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 PPP2R2CQ9Y2T4 447 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 M0R2C6 588 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 FLOT1O75955 427 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms