RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 SH3D19Q5HYK7 790 aa18.43■□□□□ 0.54
TSFM-201ENST00000323833 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
TSFM-201ENST00000323833 CLEC10AQ8IUN9 316 aa18.43■□□□□ 0.54
TSFM-201ENST00000323833 PROCA1Q8NCQ7 364 aaPredicted RBP18.43■□□□□ 0.54
TSFM-201ENST00000323833 ACER1Q8TDN7 264 aa18.43■□□□□ 0.54
TSFM-201ENST00000323833 CCDC17Q96LX7 622 aa18.43■□□□□ 0.54
TSFM-201ENST00000323833 IL25Q9H293 177 aa18.43■□□□□ 0.54
TSFM-201ENST00000323833 MKNK2Q9HBH9 465 aa18.43■□□□□ 0.54
TSFM-201ENST00000323833 PRDM1O75626 825 aa18.42■□□□□ 0.54
TSFM-201ENST00000323833 FGAP02671 866 aa18.42■□□□□ 0.54
TSFM-201ENST00000323833 RASA1P20936 1047 aa18.42■□□□□ 0.54
TSFM-201ENST00000323833 CHMLP26374 656 aa18.42■□□□□ 0.54
TSFM-201ENST00000323833 MFAP1P55081 439 aaKnown RBP18.42■□□□□ 0.54
TSFM-201ENST00000323833 ZYXQ15942 572 aaKnown RBP18.42■□□□□ 0.54
TSFM-201ENST00000323833 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
TSFM-201ENST00000323833 AGTPBP1Q9UPW5 1226 aa18.42■□□□□ 0.54
TSFM-201ENST00000323833 C19orf81C9J6K1 198 aa18.41■□□□□ 0.54
TSFM-201ENST00000323833 FKTNO75072 461 aa18.41■□□□□ 0.54
TSFM-201ENST00000323833 CYP2C8P10632 490 aa18.41■□□□□ 0.54
TSFM-201ENST00000323833 NOM1Q5C9Z4 860 aaKnown RBP18.41■□□□□ 0.54
TSFM-201ENST00000323833 FEZ1Q99689 392 aa18.41■□□□□ 0.54
TSFM-201ENST00000323833 INCENPQ9NQS7 918 aa18.41■□□□□ 0.54
TSFM-201ENST00000323833 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
TSFM-201ENST00000323833 A0A1W2PRG0 241 aa18.4■□□□□ 0.54
TSFM-201ENST00000323833 TLR2O60603 784 aa18.4■□□□□ 0.54
TSFM-201ENST00000323833 USP17L2Q6R6M4 530 aa18.4■□□□□ 0.54
TSFM-201ENST00000323833 SIAH1Q8IUQ4 282 aa18.4■□□□□ 0.54
TSFM-201ENST00000323833 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
TSFM-201ENST00000323833 SLC45A1Q9Y2W3 748 aa18.4■□□□□ 0.54
TSFM-201ENST00000323833 TACC3Q9Y6A5 838 aa18.4■□□□□ 0.54
TSFM-201ENST00000323833 PARP14Q460N5 1801 aa18.39■□□□□ 0.54
TSFM-201ENST00000323833 SLC3A2P08195 630 aaKnown RBP18.39■□□□□ 0.53
TSFM-201ENST00000323833 HAND2P61296 217 aa18.39■□□□□ 0.53
TSFM-201ENST00000323833 ICA1Q05084 483 aa18.39■□□□□ 0.53
TSFM-201ENST00000323833 PDE4BQ07343 736 aa18.39■□□□□ 0.53
TSFM-201ENST00000323833 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
TSFM-201ENST00000323833 PARK7Q99497 189 aaKnown RBP18.39■□□□□ 0.53
TSFM-201ENST00000323833 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.39■□□□□ 0.53
TSFM-201ENST00000323833 CPA4Q9UI42 421 aa18.39■□□□□ 0.53
TSFM-201ENST00000323833 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
TSFM-201ENST00000323833 ADGRA2Q96PE1 1338 aa18.39■□□□□ 0.53
TSFM-201ENST00000323833 SP3Q02447 781 aa18.38■□□□□ 0.53
TSFM-201ENST00000323833 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
TSFM-201ENST00000323833 ZNF287Q9HBT7 754 aa18.38■□□□□ 0.53
TSFM-201ENST00000323833 ANAPC4Q9UJX5 808 aa18.38■□□□□ 0.53
TSFM-201ENST00000323833 RLFQ13129 1914 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 EEF2P13639 858 aaKnown RBP18.37■□□□□ 0.53
TSFM-201ENST00000323833 USP14P54578 494 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 ATP2B2Q01814 1243 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 PABPC4Q13310 644 aaKnown RBP eCLIP18.37■□□□□ 0.533e-7■■□□□ 12.7
TSFM-201ENST00000323833 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 FAM47AQ5JRC9 791 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 C17orf99Q6UX52 265 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 CD99L2Q8TCZ2 262 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 RUFY2Q8WXA3 655 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 C12orf42Q96LP6 360 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 DSCC1Q9BVC3 393 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 ASCC2Q9H1I8 757 aaPredicted RBP18.37■□□□□ 0.53
TSFM-201ENST00000323833 KANSL2Q9H9L4 492 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
TSFM-201ENST00000323833 RAD50Q92878 1312 aa18.37■□□□□ 0.53
TSFM-201ENST00000323833 OSBPP22059 807 aa18.36■□□□□ 0.53
TSFM-201ENST00000323833 CAP1Q01518 475 aa18.36■□□□□ 0.53
TSFM-201ENST00000323833 TNS4Q8IZW8 715 aa18.36■□□□□ 0.53
TSFM-201ENST00000323833 NBPF3Q9H094 633 aa18.36■□□□□ 0.53
TSFM-201ENST00000323833 PNMA3Q9UL41 463 aa18.36■□□□□ 0.53
TSFM-201ENST00000323833 SGSM2O43147 1006 aa18.35■□□□□ 0.53
TSFM-201ENST00000323833 ECM2O94769 699 aaPredicted RBP18.35■□□□□ 0.53
TSFM-201ENST00000323833 TSPY3P0CV98 308 aa18.35■□□□□ 0.53
TSFM-201ENST00000323833 TSPY8P0CW00 308 aa18.35■□□□□ 0.53
TSFM-201ENST00000323833 VCAM1P19320 739 aa18.35■□□□□ 0.53
TSFM-201ENST00000323833 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
TSFM-201ENST00000323833 TFAP4Q01664 338 aa18.35■□□□□ 0.53
TSFM-201ENST00000323833 KIAA1755Q5JYT7 1200 aa18.35■□□□□ 0.53
TSFM-201ENST00000323833 SMCR8Q8TEV9 937 aaPredicted RBP18.35■□□□□ 0.53
TSFM-201ENST00000323833 TMX2Q9Y320 296 aa18.35■□□□□ 0.53
TSFM-201ENST00000323833 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
TSFM-201ENST00000323833 IGKV6D-41A0A0C4DH26 115 aa18.34■□□□□ 0.53
TSFM-201ENST00000323833 BCRP11274 1271 aa18.34■□□□□ 0.53
TSFM-201ENST00000323833 IRX3P78415 501 aaPredicted RBP18.34■□□□□ 0.53
TSFM-201ENST00000323833 PTH1RQ03431 593 aa18.34■□□□□ 0.53
TSFM-201ENST00000323833 RRP12Q5JTH9 1297 aaKnown RBP18.34■□□□□ 0.53
TSFM-201ENST00000323833 CTU1Q7Z7A3 348 aaKnown RBP18.34■□□□□ 0.53
TSFM-201ENST00000323833 TBC1D10CQ8IV04 446 aa18.34■□□□□ 0.53
TSFM-201ENST00000323833 NEDD1Q8NHV4 660 aa18.34■□□□□ 0.53
TSFM-201ENST00000323833 ERO1AQ96HE7 468 aa18.34■□□□□ 0.53
TSFM-201ENST00000323833 P2RX7Q99572 595 aaKnown RBP18.34■□□□□ 0.53
TSFM-201ENST00000323833 TOMM22Q9NS69 142 aa18.34■□□□□ 0.53
TSFM-201ENST00000323833 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
TSFM-201ENST00000323833 ZNF213O14771 459 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 ORC4O43929 436 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
TSFM-201ENST00000323833 FGRP09769 529 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 CEP95Q96GE4 821 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 MCOLN1Q9GZU1 580 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
TSFM-201ENST00000323833 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms