RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 IQSEC3Q9UPP2 1182 aaPredicted RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 GAKO14976 1311 aa13.79□□□□□ -0.2
NCL-201ENST00000322723 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
NCL-201ENST00000322723 SLC3A2P08195 630 aaKnown RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 SPTY2D1Q68D10 685 aaPredicted RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
NCL-201ENST00000322723 CACTINQ8WUQ7 758 aaKnown RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 AATFQ9NY61 560 aaKnown RBP eCLIP13.79□□□□□ -0.21e-72■■■■□ 26.6
NCL-201ENST00000322723 SYKP43405 635 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 SLC27A3Q5K4L6 730 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
NCL-201ENST00000322723 CERS3Q8IU89 383 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 LRRC8AQ8IWT6 810 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
NCL-201ENST00000322723 ERICH2A1L162 156 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 GYS1P13807 737 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 CCDC186Q7Z3E2 898 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 TRIM29Q14134 588 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 EARS2Q5JPH6 523 aaKnown RBP13.78□□□□□ -0.2
NCL-201ENST00000322723 SLC51AQ86UW1 340 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 WDR66Q8TBY9 1149 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 ABCF2Q9UG63 623 aa13.78□□□□□ -0.2
NCL-201ENST00000322723 USP17L12C9JPN9 530 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 USP17L21D6R901 530 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 LONRF3Q496Y0 759 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.2
NCL-201ENST00000322723 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 SH3GLB2Q9NR46 395 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.2
NCL-201ENST00000322723 GRIN1Q05586 938 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 DGKHQ86XP1 1220 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 SRBD1Q8N5C6 995 aaKnown RBP13.77□□□□□ -0.21
NCL-201ENST00000322723 CLIC6Q96NY7 704 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 CLIP2Q9UDT6 1046 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 KCNJ14Q9UNX9 436 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 PCDHB6Q9Y5E3 794 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
NCL-201ENST00000322723 MORC3Q14149 939 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 TRAPPC3LQ5T215 181 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 DAGLBQ8NCG7 672 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 KCNH3Q9ULD8 1083 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.21
NCL-201ENST00000322723 A0A087WWV3 80 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 NR5A1Q13285 461 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 PFKFB3Q16875 520 aaPredicted RBP13.76□□□□□ -0.21
NCL-201ENST00000322723 SLC35G1Q2M3R5 365 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
NCL-201ENST00000322723 TRIML1Q8N9V2 468 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 GTPBP4Q9BZE4 634 aaKnown RBP13.76□□□□□ -0.21
NCL-201ENST00000322723 TRIM5Q9C035 493 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 C4orf32Q8N8J7 132 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
NCL-201ENST00000322723 WNT7AO00755 349 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 CTIFO43310 598 aaKnown RBP13.75□□□□□ -0.21
NCL-201ENST00000322723 ZNF18P17022 549 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 GRM4Q14833 912 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 GRIK5Q16478 980 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 BICDL1Q6ZP65 573 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 CATIPQ7Z7H3 387 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 GPSM2P81274 684 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 DMTNQ08495 405 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 LRMPQ12912 555 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 FAM196AQ6ZSG2 479 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 ERCC4Q92889 916 aaPredicted RBP13.75□□□□□ -0.21
NCL-201ENST00000322723 CRAMP1Q96RY5 1269 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 AFF2P51816 1311 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 KIF13BQ9NQT8 1826 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 CYP2D6P10635 497 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
NCL-201ENST00000322723 IQCA1Q86XH1 822 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 CEP131Q9UPN4 1083 aa13.75□□□□□ -0.21
NCL-201ENST00000322723 BMP15O95972 392 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 KRT2P35908 639 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 MED15Q96RN5 788 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 GOLGA6L19H0YKK7 550 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
NCL-201ENST00000322723 E2F4Q16254 413 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 RRP12Q5JTH9 1297 aaKnown RBP13.74□□□□□ -0.21
NCL-201ENST00000322723 SDF4Q9BRK5 362 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 A0A087X0B3 334 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 ATP2B4P23634 1241 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 GSTO1P78417 241 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 DHX8Q14562 1220 aaKnown RBP13.74□□□□□ -0.21
NCL-201ENST00000322723 SAFBQ15424 915 aaKnown RBP eCLIP13.74□□□□□ -0.21
NCL-201ENST00000322723 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
NCL-201ENST00000322723 PNOCQ13519 176 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 ZRSR1Q15695 479 aaKnown RBP13.74□□□□□ -0.21
NCL-201ENST00000322723 CCDC178Q5BJE1 867 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 254.7 ms