RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ACTN2P35609 894 aa14.33□□□□□ -0.11
DNMT3A-202ENST00000321117 RFX5P48382 616 aaPredicted RBP14.33□□□□□ -0.11
DNMT3A-202ENST00000321117 MNAT1P51948 309 aa14.33□□□□□ -0.11
DNMT3A-202ENST00000321117 SMYD4Q8IYR2 804 aaPredicted RBP14.33□□□□□ -0.11
DNMT3A-202ENST00000321117 PANX2Q96RD6 677 aa14.33□□□□□ -0.11
DNMT3A-202ENST00000321117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.11
DNMT3A-202ENST00000321117 ERVV-2B6SEH9 535 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 KCNJ18B7U540 433 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 MORC3Q14149 939 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 KCNJ12Q14500 433 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 HEATR3Q7Z4Q2 680 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 SYMPKQ92797 1274 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 WDR24Q96S15 920 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 GYS2P54840 703 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 CTSWP56202 376 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 ATG9AQ7Z3C6 839 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 MAATS1Q7Z4T9 603 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 FAM71BQ8TC56 605 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 DDX17Q92841 729 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 ZNF287Q9HBT7 754 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 ZSWIM5Q9P217 1185 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 ADAM21Q9UKJ8 722 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 SPATA31D1Q6ZQQ2 1576 aa14.33□□□□□ -0.12
DNMT3A-202ENST00000321117 GNAQP50148 359 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 CSGALNACT2Q8N6G5 542 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 EPN1Q9Y6I3 576 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 NPHP4O75161 1426 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 GOLGA6CA6NDK9 693 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 GOLGA6DP0CG33 693 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 PTPREP23469 700 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 LIFRP42702 1097 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 COL9A3Q14050 684 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 PDIA6Q15084 440 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 HAUS4Q9H6D7 363 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 GREM2Q9H772 168 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 MED4Q9NPJ6 270 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 GOLGA6AQ9NYA3 693 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 FAN1Q9Y2M0 1017 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 PDE8BO95263 885 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 CYP2C19P33261 490 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 TBC1D10CQ8IV04 446 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 ACRBPQ8NEB7 543 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 TUBE1Q9UJT0 475 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 WDR19Q8NEZ3 1342 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 H2AFXP16104 143 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 VAV2P52735 878 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 FOXO4P98177 505 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 ATP2B2Q01814 1243 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 METTL16Q86W50 562 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 SRPRBQ9Y5M8 271 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 AGLP35573 1532 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 TNKSO95271 1327 aa14.32□□□□□ -0.12
DNMT3A-202ENST00000321117 COBLO75128 1261 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 PPARAQ07869 468 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 CYB5R4Q7L1T6 521 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 RPGRIP1Q96KN7 1286 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 GOLGA6BA6NDN3 693 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 FOXN1O15353 648 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 COPB1P53618 953 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 TSGA10Q9BZW7 698 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 MRFAP1Q9Y605 127 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 HEG1Q9ULI3 1381 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 CYP27B1O15528 508 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 CDC27P30260 824 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 PPM1EQ8WY54 764 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 TMX4Q9H1E5 349 aaPredicted RBP14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 BCCIPQ9P287 314 aaKnown RBP eCLIP14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 MYO1AQ9UBC5 1043 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 MROH5Q6ZUA9 1318 aa14.31□□□□□ -0.12
DNMT3A-202ENST00000321117 PTGDRQ13258 359 aa14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 MCAMP43121 646 aa14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 SECISBP2LQ93073 1101 aaKnown RBP14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 NUP58Q9BVL2 599 aa14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 ABCB6Q9NP58 842 aa14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 EXOC5O00471 708 aa14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 ZEB2O60315 1214 aa14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 MROH7-TTC4A0A0A0MT08 1334 aa14.3□□□□□ -0.12
DNMT3A-202ENST00000321117 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 PDE4DQ08499 809 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 PARP3Q9Y6F1 533 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 MFAP3LO75121 409 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 NOP2P46087 812 aaKnown RBP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 CT47A1Q5JQC4 288 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 SND1Q7KZF4 910 aaKnown RBP eCLIP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 FAM204AQ9H8W3 233 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 PIH1D3Q9NQM4 214 aaKnown RBP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 SCARF1Q14162 830 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 EPSTI1Q96J88 318 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 RABEP2Q9H5N1 569 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 NIP7Q9Y221 180 aaKnown RBP eCLIP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 H7C1D1 291 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms