RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 C19orf44Q9H6X5 657 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 HYOU1Q9Y4L1 999 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 KRT71Q3SY84 523 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
UBE2N-201ENST00000318066 DPH6Q7L8W6 267 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 ATP2A3Q93084 1043 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 CABP7Q86V35 215 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 AMFRQ9UKV5 643 aa21.06■□□□□ 0.96
UBE2N-201ENST00000318066 CRCPO75575 148 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 HOOK2Q96ED9 719 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 XPO4Q9C0E2 1151 aaKnown RBP21.05■□□□□ 0.96
UBE2N-201ENST00000318066 TROVE2P10155 538 aaKnown RBP eCLIP21.05■□□□□ 0.96
UBE2N-201ENST00000318066 CCDC105Q8IYK2 499 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 GALNT17Q6IS24 598 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 ARHGEF2Q92974 986 aaKnown RBP21.05■□□□□ 0.96
UBE2N-201ENST00000318066 SLF1Q9BQI6 1058 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 BLMP54132 1417 aaPredicted RBP21.05■□□□□ 0.96
UBE2N-201ENST00000318066 PLS1Q14651 629 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 PHLDB3Q6NSJ2 640 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 CDC37L1Q7L3B6 337 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 G2E3Q7L622 706 aa21.05■□□□□ 0.96
UBE2N-201ENST00000318066 RNF10Q8N5U6 811 aaKnown RBP21.05■□□□□ 0.96
UBE2N-201ENST00000318066 RAB3IPQ96QF0 476 aaPredicted RBP21.05■□□□□ 0.96
UBE2N-201ENST00000318066 GRK7Q8WTQ7 553 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 JDP2Q8WYK2 163 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 NCOA5Q9HCD5 579 aaKnown RBP21.04■□□□□ 0.96
UBE2N-201ENST00000318066 TACC3Q9Y6A5 838 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 ZNF131P52739 623 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 GOLGA5Q8TBA6 731 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 CCDC169A6NNP5 214 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 H7C1D1 291 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 CMA1P23946 247 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 CALCRLQ16602 461 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 ZSCAN26Q16670 478 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 LRRC59Q96AG4 307 aaKnown RBP21.04■□□□□ 0.96
UBE2N-201ENST00000318066 ARMT1Q9H993 441 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 TMEM63CQ9P1W3 806 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 PNMA8AQ86V59 439 aaPredicted RBP21.04■□□□□ 0.96
UBE2N-201ENST00000318066 VEZTQ9HBM0 779 aa21.04■□□□□ 0.96
UBE2N-201ENST00000318066 NUP153P49790 1475 aaKnown RBP21.04■□□□□ 0.96
UBE2N-201ENST00000318066 EXOC3O60645 756 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 SETSIPP0DME0 302 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 DCUN1D2Q6PH85 259 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
UBE2N-201ENST00000318066 BCL2L12Q9HB09 334 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 N4BP1O75113 896 aaKnown RBP21.03■□□□□ 0.96
UBE2N-201ENST00000318066 KRT15P19012 456 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 DDX41Q9UJV9 622 aaKnown RBP21.03■□□□□ 0.96
UBE2N-201ENST00000318066 RGS16O15492 202 aaPredicted RBP21.03■□□□□ 0.96
UBE2N-201ENST00000318066 KLHL7Q8IXQ5 586 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 MAGEF1Q9HAY2 307 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 TBX22Q9Y458 520 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 PARP3Q9Y6F1 533 aa21.03■□□□□ 0.96
UBE2N-201ENST00000318066 GEN1Q17RS7 908 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 PAXIP1Q6ZW49 1069 aaPredicted RBP21.02■□□□□ 0.96
UBE2N-201ENST00000318066 TEKT1Q969V4 418 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 STAT1P42224 750 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 PPP1R21Q6ZMI0 780 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 CCDC125Q86Z20 511 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 ZBTB21Q9ULJ3 1066 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 GADD45BO75293 160 aaPredicted RBP21.02■□□□□ 0.96
UBE2N-201ENST00000318066 GCKRQ14397 625 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 CEP120Q8N960 986 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 BBOF1Q8ND07 529 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 MYO1AQ9UBC5 1043 aa21.02■□□□□ 0.96
UBE2N-201ENST00000318066 AKNAD1Q5T1N1 836 aa21.02■□□□□ 0.95
UBE2N-201ENST00000318066 RUNDC3BQ96NL0 473 aa21.02■□□□□ 0.95
UBE2N-201ENST00000318066 BEND3Q5T5X7 828 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 REXO1Q8N1G1 1221 aaKnown RBP21.01■□□□□ 0.95
UBE2N-201ENST00000318066 FAM71BQ8TC56 605 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 GPCPD1Q9NPB8 672 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 ATP8A2Q9NTI2 1148 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 KLHL14Q9P2G3 628 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 HOXA7P31268 230 aaPredicted RBP21.01■□□□□ 0.95
UBE2N-201ENST00000318066 SLC8A1P32418 973 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 BRDTQ58F21 947 aaPredicted RBP21.01■□□□□ 0.95
UBE2N-201ENST00000318066 FAM173BQ6P4H8 233 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 TBC1D22AQ8WUA7 517 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 VCX3AQ9NNX9 186 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 E7EWF7 191 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 PPP1R12CQ9BZL4 782 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 TRIM35Q9UPQ4 493 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 PFKFB2O60825 505 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 PHBP35232 272 aa21.01■□□□□ 0.95
UBE2N-201ENST00000318066 TYW1Q9NV66 732 aaKnown RBP21.01■□□□□ 0.95
UBE2N-201ENST00000318066 ARPP21Q9UBL0 812 aaPredicted RBP21.01■□□□□ 0.95
UBE2N-201ENST00000318066 PCP11498 1178 aaKnown RBP21■□□□□ 0.95
UBE2N-201ENST00000318066 CDC25BP30305 580 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 VTI1AQ96AJ9 217 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 MAPK8IP1Q9UQF2 711 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 ZNF853P0CG23 659 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 STX2P32856 288 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 TAF12Q16514 161 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 METTL14Q9HCE5 456 aaKnown RBP21■□□□□ 0.95
UBE2N-201ENST00000318066 ABCC4O15439 1325 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 A0A1W2PQ27 194 aa21■□□□□ 0.95
UBE2N-201ENST00000318066 A0A1W2PQ64 194 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms