RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 POLR3DP05423 398 aaPredicted RBP24.36■■□□□ 1.49
SERF1A-201ENST00000317633 USP17L24Q0WX57 530 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 PAGR1Q9BTK6 254 aa24.36■■□□□ 1.49
SERF1A-201ENST00000317633 CRNKL1Q9BZJ0 848 aaKnown RBP24.36■■□□□ 1.49
SERF1A-201ENST00000317633 TRIB2Q92519 343 aa24.35■■□□□ 1.49
SERF1A-201ENST00000317633 CWC22Q9HCG8 908 aaKnown RBP24.35■■□□□ 1.49
SERF1A-201ENST00000317633 APBB1O00213 710 aa24.34■■□□□ 1.49
SERF1A-201ENST00000317633 RAB11FIP3O75154 756 aa24.34■■□□□ 1.49
SERF1A-201ENST00000317633 PDE6AP16499 860 aa24.34■■□□□ 1.49
SERF1A-201ENST00000317633 ZYXQ15942 572 aaKnown RBP24.34■■□□□ 1.49
SERF1A-201ENST00000317633 Q3C1V9 767 aa24.34■■□□□ 1.49
SERF1A-201ENST00000317633 KIAA1683Q9H0B3 1180 aa24.34■■□□□ 1.49
SERF1A-201ENST00000317633 RBM27Q9P2N5 1060 aaKnown RBP24.34■■□□□ 1.49
SERF1A-201ENST00000317633 RABGAP1Q9Y3P9 1069 aa24.34■■□□□ 1.49
SERF1A-201ENST00000317633 DDX60LQ5H9U9 1706 aaKnown RBP24.33■■□□□ 1.49
SERF1A-201ENST00000317633 GOLIM4O00461 696 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 PEX10O60683 326 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 RGS2P41220 211 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 PLCD1P51178 756 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 CCNA1P78396 465 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 TRIM32Q13049 653 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 GPR142Q7Z601 462 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 DNAJC2Q99543 621 aaKnown RBP24.33■■□□□ 1.49
SERF1A-201ENST00000317633 ZBTB40Q9NUA8 1239 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 COG6Q9Y2V7 657 aa24.33■■□□□ 1.49
SERF1A-201ENST00000317633 GLRX3O76003 335 aaKnown RBP24.32■■□□□ 1.48
SERF1A-201ENST00000317633 ZKSCAN1P17029 563 aaPredicted RBP24.32■■□□□ 1.48
SERF1A-201ENST00000317633 SHMT1P34896 483 aa24.32■■□□□ 1.48
SERF1A-201ENST00000317633 PLEKHH3Q7Z736 793 aa24.32■■□□□ 1.48
SERF1A-201ENST00000317633 NBPF3Q9H094 633 aa24.32■■□□□ 1.48
SERF1A-201ENST00000317633 PORCNQ9H237 461 aa24.32■■□□□ 1.48
SERF1A-201ENST00000317633 MCM9Q9NXL9 1143 aa24.32■■□□□ 1.48
SERF1A-201ENST00000317633 ZNF532Q9HCE3 1301 aa24.32■■□□□ 1.48
SERF1A-201ENST00000317633 PRKAR2AP13861 404 aaKnown RBP24.31■■□□□ 1.48
SERF1A-201ENST00000317633 MAP3K21Q5TCX8 1036 aa24.31■■□□□ 1.48
SERF1A-201ENST00000317633 CATSPERGQ6ZRH7 1159 aa24.31■■□□□ 1.48
SERF1A-201ENST00000317633 ALPK3Q96L96 1907 aa24.31■■□□□ 1.48
SERF1A-201ENST00000317633 MYH8P13535 1937 aa24.3■■□□□ 1.48
SERF1A-201ENST00000317633 VCAM1P19320 739 aa24.3■■□□□ 1.48
SERF1A-201ENST00000317633 MORN1Q5T089 497 aa24.3■■□□□ 1.48
SERF1A-201ENST00000317633 USP6NLQ92738 828 aa24.3■■□□□ 1.48
SERF1A-201ENST00000317633 BCL11AQ9H165 835 aa24.3■■□□□ 1.48
SERF1A-201ENST00000317633 GABPAQ06546 454 aa24.29■■□□□ 1.48
SERF1A-201ENST00000317633 LBX2Q6XYB7 198 aa24.29■■□□□ 1.48
SERF1A-201ENST00000317633 PIAS4Q8N2W9 510 aaPredicted RBP24.29■■□□□ 1.48
SERF1A-201ENST00000317633 ACER1Q8TDN7 264 aa24.29■■□□□ 1.48
SERF1A-201ENST00000317633 DIS3LQ8TF46 1054 aaKnown RBP24.29■■□□□ 1.48
SERF1A-201ENST00000317633 APBA2Q99767 749 aa24.29■■□□□ 1.48
SERF1A-201ENST00000317633 PRO3102Q9H379 93 aa24.29■■□□□ 1.48
SERF1A-201ENST00000317633 OGDHLQ9ULD0 1010 aa24.29■■□□□ 1.48
SERF1A-201ENST00000317633 A0A1W2PPC1 479 aa24.28■■□□□ 1.48
SERF1A-201ENST00000317633 TCRBV5S4A2TA0A5A2 114 aa24.28■■□□□ 1.48
SERF1A-201ENST00000317633 MPHOSPH10O00566 681 aaKnown RBP24.28■■□□□ 1.48
SERF1A-201ENST00000317633 SIRT2Q8IXJ6 389 aa24.28■■□□□ 1.48
SERF1A-201ENST00000317633 C11orf49Q9H6J7 331 aa24.28■■□□□ 1.48
SERF1A-201ENST00000317633 DCP1AQ9NPI6 582 aaPredicted RBP24.28■■□□□ 1.48
SERF1A-201ENST00000317633 SWAP70Q9UH65 585 aa24.28■■□□□ 1.48
SERF1A-201ENST00000317633 MAP2K5Q13163 448 aa24.27■■□□□ 1.48
SERF1A-201ENST00000317633 SEPT2Q15019 361 aa24.27■■□□□ 1.48
SERF1A-201ENST00000317633 WDR78Q5VTH9 848 aa24.27■■□□□ 1.48
SERF1A-201ENST00000317633 POTEEQ6S8J3 1075 aa24.27■■□□□ 1.48
SERF1A-201ENST00000317633 SDR42E1Q8WUS8 393 aa24.27■■□□□ 1.48
SERF1A-201ENST00000317633 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.27■■□□□ 1.48
SERF1A-201ENST00000317633 RPAP3Q9H6T3 665 aaPredicted RBP24.27■■□□□ 1.48
SERF1A-201ENST00000317633 PAG1Q9NWQ8 432 aa24.27■■□□□ 1.48
SERF1A-201ENST00000317633 CNMDO75829 334 aa24.26■■□□□ 1.47
SERF1A-201ENST00000317633 GUCY1A2P33402 732 aa24.26■■□□□ 1.47
SERF1A-201ENST00000317633 CACNB2Q08289 660 aaPredicted RBP24.26■■□□□ 1.47
SERF1A-201ENST00000317633 LCORLQ8N3X6 602 aa24.26■■□□□ 1.47
SERF1A-201ENST00000317633 EDC3Q96F86 508 aaKnown RBP24.26■■□□□ 1.47
SERF1A-201ENST00000317633 BOLA2Q9H3K6 86 aa24.26■■□□□ 1.47
SERF1A-201ENST00000317633 IVNS1ABPQ9Y6Y0 642 aa24.26■■□□□ 1.47
SERF1A-201ENST00000317633 MYH7P12883 1935 aa24.25■■□□□ 1.47
SERF1A-201ENST00000317633 SLC15A5A6NIM6 579 aa24.25■■□□□ 1.47
SERF1A-201ENST00000317633 ATP5JP18859 108 aa24.25■■□□□ 1.47
SERF1A-201ENST00000317633 ARMT1Q9H993 441 aa24.25■■□□□ 1.47
SERF1A-201ENST00000317633 ATP8A2Q9NTI2 1148 aa24.25■■□□□ 1.47
SERF1A-201ENST00000317633 RCAN3Q9UKA8 241 aa24.25■■□□□ 1.47
SERF1A-201ENST00000317633 ADD2P35612 726 aa24.24■■□□□ 1.47
SERF1A-201ENST00000317633 CCL14Q16627 93 aa24.24■■□□□ 1.47
SERF1A-201ENST00000317633 TMEM179Q6ZVK1 233 aa24.24■■□□□ 1.47
SERF1A-201ENST00000317633 AMOTL1Q8IY63 956 aa24.24■■□□□ 1.47
SERF1A-201ENST00000317633 C7orf61Q8IZ16 206 aa24.24■■□□□ 1.47
SERF1A-201ENST00000317633 HOXC10Q9NYD6 342 aa24.24■■□□□ 1.47
SERF1A-201ENST00000317633 BAZ2AQ9UIF9 1905 aaKnown RBP24.23■■□□□ 1.47
SERF1A-201ENST00000317633 SPDYE16A6NNV3 312 aaPredicted RBP24.23■■□□□ 1.47
SERF1A-201ENST00000317633 PTPREP23469 700 aa24.23■■□□□ 1.47
SERF1A-201ENST00000317633 MNX1P50219 401 aaPredicted RBP24.23■■□□□ 1.47
SERF1A-201ENST00000317633 COG2Q14746 738 aa24.23■■□□□ 1.47
SERF1A-201ENST00000317633 MFSD14CQ5VZR4 134 aa24.23■■□□□ 1.47
SERF1A-201ENST00000317633 DDRGK1Q96HY6 314 aa24.23■■□□□ 1.47
SERF1A-201ENST00000317633 HAUS7Q99871 368 aa24.23■■□□□ 1.47
SERF1A-201ENST00000317633 BTBD7Q9P203 1132 aa24.23■■□□□ 1.47
SERF1A-201ENST00000317633 MBD4O95243 580 aa24.22■■□□□ 1.47
SERF1A-201ENST00000317633 ARHGEF10LQ9HCE6 1279 aa24.22■■□□□ 1.47
SERF1A-201ENST00000317633 STAP2Q9UGK3 403 aa24.22■■□□□ 1.47
SERF1A-201ENST00000317633 CCND3P30281 292 aaPredicted RBP24.21■■□□□ 1.47
SERF1A-201ENST00000317633 ZSCAN25Q6NSZ9 544 aa24.21■■□□□ 1.47
SERF1A-201ENST00000317633 LRRCC1Q9C099 1032 aa24.21■■□□□ 1.47
SERF1A-201ENST00000317633 TANGO6Q9C0B7 1094 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms