RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 MMP1P03956 469 aa16.15■□□□□ 0.18
CSNK1D-202ENST00000314028 CYP2C19P33261 490 aa16.15■□□□□ 0.18
CSNK1D-202ENST00000314028 TBC1D8BQ0IIM8 1120 aa16.15■□□□□ 0.18
CSNK1D-202ENST00000314028 SPATA1Q5VX52 437 aa16.15■□□□□ 0.18
CSNK1D-202ENST00000314028 TC2NQ8N9U0 490 aa16.15■□□□□ 0.18
CSNK1D-202ENST00000314028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.15■□□□□ 0.18
CSNK1D-202ENST00000314028 BCCIPQ9P287 314 aaKnown RBP eCLIP16.15■□□□□ 0.188e-7■■□□□ 14.4
CSNK1D-202ENST00000314028 PDE8BO95263 885 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 CAVIN4Q5BKX8 364 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 TMTC2Q8N394 836 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 POLD4Q9HCU8 107 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 ATP2C2O75185 946 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 HLTFQ14527 1009 aaKnown RBP eCLIP16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 CCDC42Q96M95 316 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 FAM204AQ9H8W3 233 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 UTYO14607 1347 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 GYG1P46976 350 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 CYP27A1Q02318 531 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 RNF187Q5TA31 235 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 CYP26C1Q6V0L0 522 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 ENOX1Q8TC92 643 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 IFT81Q8WYA0 676 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 GPKOWQ92917 476 aaPredicted RBP eCLIP16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 TRIM10Q9UDY6 481 aa16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-202ENST00000314028 TECPR2O15040 1411 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 PSMA7O14818 248 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 SASH3O75995 380 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 CTSWP56202 376 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 SETQ01105 290 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 ODF2Q5BJF6 829 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 RAD9BQ6WBX8 426 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 GPR108Q9NPR9 543 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 MYO6Q9UM54 1294 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 ANKARQ7Z5J8 1434 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 KCNJ18B7U540 433 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 KRT86O43790 486 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 KIAA0754O94854 1291 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 KIF5AQ12840 1032 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 KCNJ12Q14500 433 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 GDAQ9Y2T3 454 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 MRFAP1Q9Y605 127 aa16.13■□□□□ 0.17
CSNK1D-202ENST00000314028 CCDC151A5D8V7 595 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 SPAG1Q07617 926 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 MORC3Q14149 939 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 BRD3Q15059 726 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 TMTC1Q8IUR5 882 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 BPIFA3Q9BQP9 254 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 LY9Q9HBG7 655 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 KRT18P05783 430 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 RASGRF1Q13972 1273 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 ZBTB38Q8NAP3 1195 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 STRBPQ96SI9 672 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 PCDH11XQ9BZA7 1347 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 PCDH11YQ9BZA8 1340 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 TRIM49BA6NDI0 452 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 MYO1CO00159 1063 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 PLEKHA8P1O95397 391 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 IVLP07476 585 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 CXCR5P32302 372 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 CYLC1P35663 651 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 PAFAH1B1P43034 410 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 PPARAQ07869 468 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 TRIM65Q6PJ69 517 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 RIN2Q8WYP3 895 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 LPIN2Q92539 896 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 FAM207AQ9NSI2 230 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 AATFQ9NY61 560 aaKnown RBP eCLIP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 RRP15Q9Y3B9 282 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 ADGRG1Q9Y653 693 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 PEAK1Q9H792 1746 aa16.12■□□□□ 0.17
CSNK1D-202ENST00000314028 SHTN1A0MZ66 631 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 USP17L21D6R901 530 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 USO1O60763 962 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 PTPREP23469 700 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 GTF2A1P52655 376 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 SND1Q7KZF4 910 aaKnown RBP eCLIP16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 CSGALNACT2Q8N6G5 542 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 TTLL11Q8NHH1 800 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 AFAP1L1Q8TED9 768 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 FMNL1O95466 1100 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 FXR1P51114 621 aaKnown RBP eCLIP16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 VSNL1P62760 191 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 CASP8Q14790 479 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 DZIP1Q86YF9 867 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 JAKMIP2Q96AA8 810 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 TCP11L1Q9NUJ3 509 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 EXOC1Q9NV70 894 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 ZBTB1Q9Y2K1 713 aa16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 EPN1Q9Y6I3 576 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-202ENST00000314028 IFNAR1P17181 557 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms