RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 UTP11Q9Y3A2 253 aaKnown RBP20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 EXOC3O60645 756 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 ERCC5P28715 1186 aaPredicted RBP20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 IRX5P78411 483 aaPredicted RBP20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 CEP104O60308 925 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 TYW1BQ6NUM6 668 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 TMTC1Q8IUR5 882 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 REXO1Q8N1G1 1221 aaKnown RBP20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 RAB3IL1Q8TBN0 382 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 AFAP1L1Q8TED9 768 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 ZSCAN10Q96SZ4 725 aaPredicted RBP20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 NAP1L3Q99457 506 aaPredicted RBP20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 HSPD1P10809 573 aaKnown RBP20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 USP40Q9NVE5 1235 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 ERVV-2B6SEH9 535 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 NOP56O00567 594 aaKnown RBP20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 MAGEA1P43355 309 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 GLT8D2Q9H1C3 349 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 PLEKHG3A1L390 1219 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 PPP2R5BQ15173 497 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 RDH13Q8NBN7 331 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 LZTS2Q9BRK4 669 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 USP28Q96RU2 1077 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 TUBBP07437 444 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 ADD1P35611 737 aaKnown RBP20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 TAF12Q16514 161 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 LIN9Q5TKA1 542 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 TPH2Q8IWU9 490 aa20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 ARPP21Q9UBL0 812 aaPredicted RBP20.67■□□□□ 0.9
UBXN2A-201ENST00000309033 KLHL30Q0D2K2 578 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 LRMPQ12912 555 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 UBL4BQ8N7F7 174 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 E7EVH7 732 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 KRBA2Q6ZNG9 492 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 NLRC4Q9NPP4 1024 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 ARHGAP6O43182 974 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 RPS8P62241 208 aaKnown RBP20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 NKIRAS1Q9NYS0 192 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 CFAP157Q5JU67 520 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 RNF123Q5XPI4 1314 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 GOLGA8HP0CJ92 632 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 LTKP29376 864 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 RRAGAQ7L523 313 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 C10orf67Q8IYJ2 551 aa20.66■□□□□ 0.9
UBXN2A-201ENST00000309033 ARHGAP44Q17R89 818 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 MFSD14BQ5SR56 506 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 GPR161Q8N6U8 529 aaKnown RBP20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 RNF34Q969K3 372 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 GTF2A1P52655 376 aaPredicted RBP20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 SETDB1Q15047 1291 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 ADALQ6DHV7 355 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 ZNF274Q96GC6 653 aaPredicted RBP20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 TRIM7Q9C029 511 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 MYO1AQ9UBC5 1043 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 SFMBT2Q5VUG0 894 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 ZBED4O75132 1171 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 TECP42680 631 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 CERS3Q8IU89 383 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 GPKOWQ92917 476 aaPredicted RBP eCLIP20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 HAUS7Q99871 368 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 SLAIN2Q9P270 581 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 PDE6AP16499 860 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 FAM204AQ9H8W3 233 aa20.65■□□□□ 0.9
UBXN2A-201ENST00000309033 ZNF365Q70YC5 407 aa20.64■□□□□ 0.9
UBXN2A-201ENST00000309033 DAAM2Q86T65 1068 aa20.64■□□□□ 0.9
UBXN2A-201ENST00000309033 NOSTRINQ8IVI9 506 aa20.64■□□□□ 0.9
UBXN2A-201ENST00000309033 TMEM2Q9UHN6 1383 aa20.64■□□□□ 0.9
UBXN2A-201ENST00000309033 SORBS3O60504 671 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 ZNF827Q17R98 1081 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 ZSWIM6Q9HCJ5 1215 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 PODXL2Q9NZ53 605 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 CCDC160A6NGH7 325 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 PROSER3Q2NL68 480 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 IFT20Q8IY31 132 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 CLIC6Q96NY7 704 aa20.64■□□□□ 0.89
UBXN2A-201ENST00000309033 HGSO14964 777 aaPredicted RBP20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 ACTN4O43707 911 aaKnown RBP20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 PFKFB2O60825 505 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 KRT19P08727 400 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 MAP7D1Q3KQU3 841 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 CCDC14Q49A88 953 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 TLR7Q9NYK1 1049 aaKnown RBP20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 MTMR6Q9Y217 621 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 ZMYM6O95789 1325 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 CSRNP2Q9H175 543 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 KIAA1468Q9P260 1216 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 FGAP02671 866 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 LRRC47Q8N1G4 583 aaKnown RBP20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 PLEKHF1Q96S99 279 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 ADCY9O60503 1353 aa20.63■□□□□ 0.89
UBXN2A-201ENST00000309033 LSM14BQ9BX40 385 aaKnown RBP20.62■□□□□ 0.89
UBXN2A-201ENST00000309033 PCDHB13Q9Y5F0 798 aa20.62■□□□□ 0.89
UBXN2A-201ENST00000309033 TNKSO95271 1327 aa20.62■□□□□ 0.89
UBXN2A-201ENST00000309033 SCNN1DP51172 638 aa20.62■□□□□ 0.89
UBXN2A-201ENST00000309033 SF3A3Q12874 501 aaKnown RBP eCLIP20.62■□□□□ 0.89
UBXN2A-201ENST00000309033 TTC31Q49AM3 519 aaPredicted RBP20.62■□□□□ 0.89
UBXN2A-201ENST00000309033 C2CD5Q86YS7 1000 aa20.62■□□□□ 0.89
UBXN2A-201ENST00000309033 GDAP1L1Q96MZ0 367 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms