RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 H0YIN7 160 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 SASH1O94885 1247 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
TMOD3-201ENST00000308580 MAEAQ7L5Y9 396 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 NF2P35240 595 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 NDUFA8P51970 172 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 VWA3BQ502W6 1294 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 STK32BQ9NY57 414 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 GOLGA8HP0CJ92 632 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 INF2Q27J81 1249 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 NUP58Q9BVL2 599 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 ZEB2O60315 1214 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 HDXQ7Z353 690 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 CCDC25Q86WR0 208 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 ZMYND15Q9H091 742 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 DNM3Q9UQ16 869 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 DDX39AO00148 427 aaKnown RBP11.06□□□□□ -0.64
TMOD3-201ENST00000308580 TNFAIP3P21580 790 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
TMOD3-201ENST00000308580 NSUN7Q8NE18 718 aaKnown RBP11.05□□□□□ -0.64
TMOD3-201ENST00000308580 GIMAP7Q8NHV1 300 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 DDX12PQ92771 950 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 IVLP07476 585 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 APOA5Q6Q788 366 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 GPKOWQ92917 476 aaPredicted RBP eCLIP11.05□□□□□ -0.642e-6■■■■□ 21.7
TMOD3-201ENST00000308580 SEC31BQ9NQW1 1179 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 PREX2Q70Z35 1606 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 SLC9C1Q4G0N8 1177 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 NSMFQ6X4W1 530 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 KRBA2Q6ZNG9 492 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 FAM207AQ9NSI2 230 aaPredicted RBP11.05□□□□□ -0.64
TMOD3-201ENST00000308580 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 SCG2P13521 617 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 POLA2Q14181 598 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 TSC1Q92574 1164 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 SECISBP2LQ93073 1101 aaKnown RBP11.05□□□□□ -0.64
TMOD3-201ENST00000308580 KLRF2D3W0D1 207 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 MYCLP12524 364 aaPredicted RBP11.05□□□□□ -0.64
TMOD3-201ENST00000308580 PPP1R14CQ8TAE6 165 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 FNBP1Q96RU3 617 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 ATP2A1O14983 1001 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 PSMB7Q99436 277 aa11.05□□□□□ -0.64
TMOD3-201ENST00000308580 FMNL3Q8IVF7 1028 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 FANCLQ9NW38 375 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 M0R2C6 588 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 SMTNP53814 917 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 ASIC2Q16515 512 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
TMOD3-201ENST00000308580 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
TMOD3-201ENST00000308580 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 MED23Q9ULK4 1368 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 LARGE1O95461 756 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 CCDC84Q86UT8 332 aaPredicted RBP11.04□□□□□ -0.64
TMOD3-201ENST00000308580 OSBP2Q969R2 916 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 IQCGQ9H095 443 aaKnown RBP11.04□□□□□ -0.64
TMOD3-201ENST00000308580 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
TMOD3-201ENST00000308580 KRT5P13647 590 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 CALCOCO2Q13137 446 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 C8orf74Q6P047 294 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 ARFGAP2Q8N6H7 521 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 MTUS1Q9ULD2 1270 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 SPOPO43791 374 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 TEKT1Q969V4 418 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 NLRC4Q9NPP4 1024 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 MTRF1LQ9UGC7 380 aaKnown RBP11.04□□□□□ -0.64
TMOD3-201ENST00000308580 CEP83Q9Y592 693 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 PPP1R7Q15435 360 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 NPHP4O75161 1426 aaPredicted RBP11.04□□□□□ -0.64
TMOD3-201ENST00000308580 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 NOX5Q96PH1 765 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
TMOD3-201ENST00000308580 CFAP74Q9C0B2 1584 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 MYCT1Q8N699 235 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■□□□□ 8.2
TMOD3-201ENST00000308580 KIF4AO95239 1232 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 LRRC47Q8N1G4 583 aaKnown RBP11.03□□□□□ -0.64
TMOD3-201ENST00000308580 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 PCDHA5Q9Y5H7 936 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 EXOC3O60645 756 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 MRFAP1L1Q96HT8 127 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 PICK1Q9NRD5 415 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 A0A1W2PQ27 194 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 A0A1W2PQ64 194 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 A0A1W2PQD8 194 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 SCNN1DP51172 638 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 KLHL30Q0D2K2 578 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 PUS7LQ9H0K6 701 aaKnown RBP11.03□□□□□ -0.64
TMOD3-201ENST00000308580 ZNF804BA4D1E1 1349 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
TMOD3-201ENST00000308580 TECP42680 631 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 BTDP43251 543 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 TUBB2AQ13885 445 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 WDR44Q5JSH3 913 aa11.03□□□□□ -0.64
TMOD3-201ENST00000308580 TUBB2BQ9BVA1 445 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms